Shewanella sp. MR-7: Shewmr7_1160
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Entry
Shewmr7_1160 CDS
T00389
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00260
Glycine, serine and threonine metabolism
shm00460
Cyanoamino acid metabolism
shm00630
Glyoxylate and dicarboxylate metabolism
shm00670
One carbon pool by folate
shm00680
Methane metabolism
shm01100
Metabolic pathways
shm01110
Biosynthesis of secondary metabolites
shm01120
Microbial metabolism in diverse environments
shm01200
Carbon metabolism
shm01230
Biosynthesis of amino acids
shm01240
Biosynthesis of cofactors
shm04981
Folate transport and metabolism
Module
shm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewmr7_1160
09102 Energy metabolism
00680 Methane metabolism
Shewmr7_1160
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Shewmr7_1160
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Shewmr7_1160
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Shewmr7_1160
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Shewmr7_1160
Enzymes [BR:
shm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Shewmr7_1160
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABI42159
UniProt:
Q0HXJ6
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All DBs
Position
1351512..1352765
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgttcaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaattaaccaacaagtacgccgaaggttaccct
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacttacgcaaacgtgcaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcacggtggtcacttgacccacggttcacctgtaaacttctccggtagactgtac
aacatcattccttacggcatcgacgaatcaggcaaaatcgactatgacgaaatggaacgt
ctggcggttgaacataagcctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgcgaaatcgcagacaaaatcggtgcttacctgtttgtcgac
atggcgcacgttgcgggtcttatcgccgcgggtgtgtatccaaacccagtgccacacgcg
cacgttgtgacctctactactcacaagaccttagctggtcctcgtggcggtatcattctg
tctgctgccgatgatgaagagctatacaaaaagctaaactcagcggtattcccaggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtcgccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaacgctaaagccatggttgaa
gtgttcttagagcgcggttacaagatcgtttctggcggtactgacaaccacttaatgctg
gtggacttaattggtcgcgacctgacgggtaaagaagccgatgccgctttaggtagcgcg
aacatcacagtaaacaaaaactctgtgccaaacgatccacgttctccattcgtgacctct
ggtgtacgtattggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gagttaaccggttggatctgtgacatcctcgacgatgcccacaacccagcggttatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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