Shewanella sp. MR-7: Shewmr7_1202
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Entry
Shewmr7_1202 CDS
T00389
Name
(GenBank) DNA polymerase III chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm03030
DNA replication
shm03430
Mismatch repair
shm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shewmr7_1202
03430 Mismatch repair
Shewmr7_1202
03440 Homologous recombination
Shewmr7_1202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shm03032
]
Shewmr7_1202
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_1202
Enzymes [BR:
shm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shewmr7_1202
DNA replication proteins [BR:
shm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shewmr7_1202
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shewmr7_1202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ABI42201
LinkDB
All DBs
Position
complement(1408153..1408617)
Genome browser
AA seq
154 aa
AA seq
DB search
MTQALFYLLPPMGVNTALSDMYQLACRLAQQGFINQQQVYIHCQDKNIAFEIDELLWQFE
PSAFVPHNLKGEGPTTGSPVEIGFDRLGPNKSRQLLINLADQVPPFAVNFGQIFDFVAND
DQHKAIARERYRQYRGLGIELTTQNLATHPLNLA
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagcgctgttttatctactgccgccgatgggggtgaacaccgcccttagtgac
atgtatcaattggcttgccgcttggcccaacagggatttataaaccagcaacaggtctat
attcactgtcaggacaagaacattgccttcgaaatcgacgagttattatggcagtttgaa
cccagtgcatttgtcccccacaacctcaaaggtgaaggcccgaccacaggctcacccgtt
gaaatcggttttgacaggctcggcccaaacaaaagtcgccaacttctgattaatcttgca
gaccaagtgcctccgtttgcggtaaactttggtcaaatcttcgattttgtggctaatgac
gaccaacataaagcgatagcacgtgaacgctaccgccaatatcgtggcttagggattgaa
ttaacaacccaaaatttagcaacacatccacttaatttagcttga
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