Shewanella sp. MR-7: Shewmr7_1236
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Entry
Shewmr7_1236 CDS
T00389
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_1236
Enzymes [BR:
shm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Shewmr7_1236
DNA repair and recombination proteins [BR:
shm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Shewmr7_1236
Prokaryotic type
Shewmr7_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABI42235
UniProt:
Q0HXC0
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All DBs
Position
1448083..1449564
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AA seq
493 aa
AA seq
DB search
MSDNQPQAAKHALMWFRQDLRLTDNQALTAACDWVRQAPGAKLRAIYIATPSQWLSHDMA
PIQIDFIQRHVNLLAQGLASLGIEFELIQLDSFKEVPAFLASYCEKLGVERVFAGREPEI
NEQKRDQACLDAGIPLVLSDEHCLLPPGTVLNLSGDMYKVFTPFSRKWREVAAKRAILPL
AVPAPLGPMLPEPKPISFKERFPFTSKLTSSEQWAAGEGQAKRILTAFIQQKAQDYKQDR
DFPALEGTSVISPYLALGVLSPRQCIAALLGRFPEVIVDDTSPGRTWLNELIWREFYRHL
LVAFPDLSKGHNFNRQADHVQWRNNQAEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLR
MVVASFLTKHLLIDWRWGERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQ
SEKFDPDGSFIRKYLPELASWGIKRLHQPNMQKTPSLFEVQMLESDSAYPCAIVEHNAAR
ARALAVLGVLKKA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataatcaaccccaagcggcaaagcacgcgttgatgtggtttcgccaggatctg
cgtctaacggataaccaagcgctgacggctgcctgtgattgggtgcggcaagcgcctggc
gcaaaactcagggcgatttatattgcgactccgagccaatggctcagccacgatatggcg
ccgatccagattgattttatccagcggcatgtgaatttgctcgcccaaggactcgcaagc
ctagggattgaatttgagcttattcagctcgatagctttaaagaggtgcccgctttttta
gcgagttactgtgaaaagcttggggttgaacgggtgttcgcggggcgagaacccgaaatc
aacgagcaaaagcgcgaccaagcctgtctcgatgcgggtatccccttggtgcttagtgac
gaacactgcctattgccgccgggcacagtgcttaacttaagcggtgatatgtataaggtg
ttcacgccctttagccgcaagtggcgagaagttgccgccaagcgcgccattttgccgctt
gctgtacctgcgccgcttggccctatgttacctgaaccaaagccaatcagttttaaagaa
cgtttcccattcactagcaagctaacctcgagcgagcaatgggcggcgggagaggggcag
gcaaaacgtattcttaccgcatttattcagcaaaaagcccaagactataaacaggatagg
gactttcctgctctcgaggggaccagtgttatctccccttatttggcgctgggcgtgctg
agcccaaggcaatgtatcgcggcgctgcttgggcgttttcccgaggtgattgtcgatgat
actagccctgggcgaacctggttgaatgagctgatctggcgggagttttatcgccatttg
ttagtcgcctttccagatttatccaaggggcacaactttaatcgtcaggccgaccatgtg
cagtggcgcaacaaccaagctgagtttttggcgtggtgcgagggcaaaacgggttacccg
attgtagatgcggcgatgcgccagcttaatcaaaccggctggatgcacaatcggttgcgt
atggtggtggcgagctttttaactaaacacttgcttatcgattggcgctggggggaacgc
tatttccgccagcatcttatcgacggcgatctggcggctaataacggtggctggcaatgg
tcggcgggctgtggctgcgatgcccagccttatttccgcatttttaatcctatcagccag
agcgaaaagtttgatccagatggcagctttatccgtaagtacttaccagagctggcatct
tggggaatcaagcgtttgcaccaacccaatatgcaaaaaacgccttcgttatttgaggtg
caaatgctggagtctgactcggcttatccctgtgcgattgtggagcacaatgcggcaagg
gcgagggcgctagcggtacttggggtgctgaaaaaggcctag
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