Shewanella sp. MR-7: Shewmr7_1660
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Entry
Shewmr7_1660 CDS
T00389
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shm03032
]
Shewmr7_1660
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_1660
Enzymes [BR:
shm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Shewmr7_1660
DNA replication proteins [BR:
shm03032
]
Prokaryotic type
DNA Topoisomerases
Shewmr7_1660
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Shewmr7_1660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
Motif
Other DBs
NCBI-ProteinID:
ABI42655
UniProt:
Q0HW50
LinkDB
All DBs
Position
1954225..1956909
Genome browser
AA seq
894 aa
AA seq
DB search
MEPISTFLRFFGANQTMGKSLVIVESPAKAKTINKYLGKEFIVKSSVGHIRDLPTSSSSD
GTEKVKSAAEVKKMSPEEKARYKKVKEHQALVSRMGVNPEKGWAAKYQILPGKEKVVKEL
QALADSADQIYLATDLDREGEAIAWHLQEVIGGDSSRYQRVVFNEITKSAIQEAFSKPSA
LDTNMVNAQQARRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVRLVVERESEIKAFVP
EEFWDVHAQLNTPASEALRMEVVKYLDSAFEPTNEQQALAAVQALSSASFKVIAREDKAT
QSKPSAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEALDSVR
EMIGKEYGAKYLPAEPIRYGSKEGAQEAHEAIRPSNVNVEAAALTDMERDAQRLYELIWR
QFVSCQMTPAQYDATKLTVKAGDYELKATGRILRFDGWTRVQTALKKKNEEDNTLPSVNE
GDLLSLVELEPKQHFTKPPARYSEASLVKELEKRGIGRPSTYATIISTIQERGYVKVENR
RFYAEKMGEIVSERLVGSFAELMSYDFTASMEQTLDDVAKGELDWKKVLDGFYADFTKQL
EKAELAPEEGGMRLNQMVMTNIKCPTCGRPMGIRTGTTGVFLGCSGYELPPKERCKTTMN
LTPGIEAISDSEDAETDALRAKHRCGICGTAMDSYLIDEKRKLHVCGNNPVCEGYEVEEG
QFKIKGYEGPLIECDRCGHDMELKNGRFGKYFGCTNSECKNTRKLLKNGEAAPPKEDPIY
LPELKCSKSDAHFVLRDGAAGIFLAASTFPKSRETRAPLVEELVKYRELLWPKYQYLADA
PIADDEGNKAAVKFSRKTKEQYVATEVGGKATGWSAHYVNGKWVTESTANKAKK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatttccaccttcttgagattttttggcgcaaatcaaactatgggtaaatcg
ctagttattgtcgaatcaccggccaaagctaagaccattaataaatatcttggcaaagaa
ttcatcgttaaatcgagcgtaggtcacatccgtgatctacctacatcttcttcatctgac
ggcactgaaaaggtgaaatccgccgcagaagtcaagaagatgtcgccagaagaaaaggcg
cgatacaaaaaggtgaaagaacatcaagcgctggtatcgcgtatgggcgttaaccctgaa
aagggctgggcggctaaatatcaaatcctaccgggtaaagagaaagttgttaaagagcta
caagctttagccgattctgctgaccaaatttatctcgcaacggacttagaccgtgaaggg
gaagccattgcctggcacttgcaagaggtgattggtggcgactcttcacggtatcagcgc
gtggtgtttaacgagatcactaaatcagcgattcaagaagcttttagtaaaccttcagcc
cttgacaccaatatggtcaatgcccaacaggcacgacgctttttagatcgcgttgtcggc
tttatggtgtcaccactattgtggaagaaggttgcccgcggtttatcggctggacgggta
caatctgtggctgtgcgtctcgtggtggaacgtgaaagcgaaatcaaagccttcgtccca
gaagaattttgggatgtgcatgctcagctcaatacgcctgctagcgaagcgctgcgcatg
gaagtggttaagtacttagactcagcctttgagccaacaaatgagcagcaagcattggcc
gccgttcaggccttatcttcagccagctttaaagtcattgcccgcgaagataaagccact
cagagtaaaccttcggctccttttattacctccaccttgcagcaagcggccagtactcgc
ttaggctttggggtgaagaaaaccatgatgatggcgcagcgtttgtacgaagcgggtcac
atcacttatatgcgtaccgactccacaaacctaagccaagaagctttagacagtgtgcgt
gagatgattggcaaggaatacggcgccaagtatttacctgccgaaccgattcgctacggc
tctaaagaaggcgctcaagaggcgcacgaagcgattcgtccttcaaatgtgaacgtcgaa
gccgcagctttaactgatatggaacgtgatgcgcagcgcctttatgagttgatctggcgt
cagtttgtctcctgtcagatgacacctgctcaatacgatgcgactaaactcacggtaaaa
gcgggcgattacgaactgaaagcgacgggacgtatcctgcgttttgacggttggacccgt
gttcaaaccgcattgaaaaagaaaaacgaagaagacaatacactgccctcggtgaacgaa
ggtgatctgttgtctctggtcgaattagagcccaaacagcactttaccaagccgcccgcc
agatacagcgaagcgtcattggtgaaagagttagagaagcgtggcattggccggccatca
acctatgccaccattatttcgacgattcaagaacggggttatgtcaaagttgaaaaccgc
cgtttctatgccgagaaaatgggtgaaatcgttagcgaacgcctcgtcggtagttttgcc
gagctgatgagctatgattttaccgccagcatggaacagactctcgatgatgttgccaaa
ggtgaactggattggaaaaaagtcctcgatggcttctatgccgacttcactaagcaatta
gagaaggctgagttagcaccggaagagggcggtatgcgcctcaatcaaatggtgatgact
aatattaagtgtccgacttgcggtcgtccaatggggatccggactggcacaacaggggta
ttccttggttgttcgggttacgagttgccaccaaaagaacgctgcaaaactaccatgaac
ttaacgccaggcattgaagcgataagcgacagtgaggatgccgagaccgatgcactgcgt
gctaagcaccgctgtggtatttgcggcacggcgatggacagttatcttatcgacgaaaaa
cgcaaactgcatgtttgtggtaataaccctgtttgtgagggctatgaggtcgaagaaggg
caatttaagatcaaaggttacgaaggtccattaatcgaatgtgaccgttgcggccatgat
atggaactgaaaaacggtcgttttggtaagtatttcggttgtactaattcggaatgtaag
aatacccgtaagttactgaaaaacggtgaagcggcgccaccaaaagaagatcctatctat
ctgcctgagctgaaatgcagcaagtctgatgcgcattttgtgctacgtgatggcgcggcg
gggatttttttagcggccagtactttccctaaatcacgggaaacccgcgcaccactggtt
gaagagttagtgaaataccgtgaactgttatggcctaagtatcagtatcttgccgatgca
cctatcgccgatgatgagggcaacaaagcggcggttaagtttagccgtaagaccaaagag
caatacgtggcgaccgaagttggcggtaaagcaaccgggtggtcggctcattatgtgaat
ggtaaatgggtgacagaatcgacggcgaataaagccaagaaatag
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