Shewanella sp. MR-7: Shewmr7_1681
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Entry
Shewmr7_1681 CDS
T00389
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00020
Citrate cycle (TCA cycle)
shm00480
Glutathione metabolism
shm00720
Other carbon fixation pathways
shm01100
Metabolic pathways
shm01110
Biosynthesis of secondary metabolites
shm01120
Microbial metabolism in diverse environments
shm01200
Carbon metabolism
shm01210
2-Oxocarboxylic acid metabolism
shm01230
Biosynthesis of amino acids
shm04146
Peroxisome
Module
shm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shm_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Shewmr7_1681
09102 Energy metabolism
00720 Other carbon fixation pathways
Shewmr7_1681
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Shewmr7_1681
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Shewmr7_1681
Enzymes [BR:
shm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Shewmr7_1681
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Gene cluster
GFIT
Motif
Pfam:
IDH
HTH_39
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
ABI42675
UniProt:
Q0HW30
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All DBs
Position
1982384..1984609
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AA seq
741 aa
AA seq
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MKDNSPTIIYTETDEAPALATLSLLPIIKTFTDAAGVAVETRDISLSGRVIANFPEKLTD
AQKIGDHLAELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWSKESQSHVAHMSE
GDFYGSEQSVTLANADTVNIVLSQKDGQEVVLKSGLKLLAGEIIDASVMSKKALVSFFER
EIANAKAENVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHASLFAELGVDVNNGFG
DVYAKIASLPADVRAQIEADIAAVYAERPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGKLHDTKALIPDRCYAGVYQETIAFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVIDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDANRAHDAQLIAKVKQYLPEHDTSGLEISIMSPEEATRFSLVRIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTKDEQLQAHFIPLAHALAANEQVIVAELNNAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcaccaacaattatttataccgaaaccgatgaagcgccagcactggca
acgctttctctgttacctatcatcaaaacctttaccgatgcggcgggtgttgcggttgaa
acccgtgatatttctttatcgggccgtgtgattgcaaatttccctgaaaaactgactgac
gcgcaaaaaattggcgatcacttagctgagctgggcgaattagccaatcaacctgaagca
aacatcatcaaactgccaaacatcagtgcctcgattccgcagttaaaagcctgtatttta
gagctgcaacagaaaggttacgacattccaaattatcctgacgagccaaagactgacgaa
gaaaagtctatcaaagcccgttacgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaactctgatcgccgtgcgccgctttcagtgaaaaacttcgccaagaaaaac
ccgcactctatgggtaaatggagtaaagagtcacaatctcacgttgctcacatgagcgaa
ggtgacttctacggtagcgagcagtctgtgactctggctaacgccgacacagttaacatc
gtattgtctcaaaaagacggtcaagaagtggtgttgaagtcaggcctgaaactgctagct
ggtgagatcatcgacgcgtcagtgatgagcaaaaaagccttagtcagcttctttgagcgt
gaaatcgctaatgccaaggctgaaaacgtgttgttatcactgcaccttaaagccaccatg
atgaaagtgtccgatcccatcatgtttggccacgcggtgaaagtgttcttcaaacctgtg
tttgataaacatgcgtcattatttgctgagttaggtgtagacgtaaacaatggctttggc
gatgtttacgcgaaaatcgccagcttaccagccgatgtccgtgcacaaatcgaagcggat
atcgccgccgtttatgctgagcgcccagcgctggcgatggtagattctgataaaggtatc
actaacttacacgtaccaagcgacatcattatcgatgcgtctatgcctgcggcgattcgt
tcatctggccaaatgtggggccctgatggcaagttgcacgacactaaagcgctgatccca
gaccgttgctacgcgggtgtgtatcaagaaactatcgctttctgtaaagagcacggtgct
ttcgatccaagcacaatgggcagtgtgccaaacgttggtctgatggctcaaaaagccgaa
gaatatggtagccacgataaaaccttcgaaatcccagctgatggcgtagttaacgtgatt
gatgccagtggcaaagtgttaatgagccacaacgttgaagcgggcgatatttggagaatg
tgccaagttaaagatgcgccaattcgcgactgggtgaaattagctgtacgccgtgcacgc
ttaagcaatactcctgcggtattctggttagatgcgaatcgtgcccacgatgcgcagctg
attgctaaagtgaagcaatatctgcctgagcatgatacaagcggtttagaaatcagcatc
atgtcaccagaagaagcgactcgtttctcattagtgcgtattaaagaaggtaaagatact
atttctgttaccggtaacgtactgcgtgactacctgactgacttattcccaattctcgaa
ctgggtaccagtgctaagatgctgtctatcgtgccattaatgaatggtggcggcctgttc
gaaacgggtgcgggcggtagtgcgcctaaacacgtacaacaggttgaaaaagaaggtcac
ttacgttgggactctctgggtgaattcctggctttagcggcttctttagagcatttaagc
caaacagtgggtaaccctaaggcacaagtactggcggatactttagatcaagccatcggt
cagttcttagatagcaacaagtcgccatcaagacgcgttggtgaactagataaccgtggt
agccatttctatctggcgatgtactgggcacaagcattagctgcgcaaaccaaagatgag
cagttacaagctcactttattccactggcgcacgcactagctgccaatgagcaagtaatt
gttgctgagttaaacaatgcgcaaggtgcaccagtggatttaggcggttactaccgttta
gatgctgcaaaagctgaaaaagccatgcgcccaagtgaaacactgaacaagttattaatt
gcttaa
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