Shewanella sp. MR-7: Shewmr7_1914
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Entry
Shewmr7_1914 CDS
T00389
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
shm
Shewanella sp. MR-7
Pathway
shm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shewmr7_1914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_1914
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shewmr7_1914
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Shewmr7_1914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
Ish1
Kinesin
DUF2963
Motif
Other DBs
NCBI-ProteinID:
ABI42903
UniProt:
Q0HVF2
LinkDB
All DBs
Position
2261054..2263075
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AA seq
673 aa
AA seq
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MSESVFQLESQFAPAGDQPTAIAKLVDGLESGLACQTLLGVTGSGKTFTIANVIAQLGRP
TIIMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRQGDTMGQRDILKRLSEL
QYTRNDIELQRGTFRVRGEVIDIFPADSDRYGIRVELFDDEIERLSEFDPLTGQIVKRIA
RTTVYPKTHYVTPREKILEATESIKQELRERKQYLLDNNKLIEAQRIHERVQYDIEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPNPYELEKSDGEIVEQVVRPTGLL
DPELEVRPVNIQVDDLLSEVAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITQSMAKAMGETERRREKQRAYNLEHGIVPKGVVKRITDVMDV
DDGRESEKGYRQSSLDKVAEPKAKRYQADAAQLSHDIDKLEKQMHEHARNLEFEEAAALR
DEVKRLRELLITA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaatctgtttttcagcttgaatcccaatttgcccccgcaggggatcagcccacg
gctattgctaaattggtcgatggtctcgaatcaggcctagcttgccaaaccctattgggg
gtaacaggctccggcaagacattcaccatcgccaatgtgatcgctcagcttgggcgccca
accattattatggcgccaaacaagacactggctgcgcagctctatggtgagatgaaagag
tttttccccaataatgcggtggaatattttgtttcctattacgactattaccaaccagaa
gcctacgtgcctgcatcgaatacctttattgagaaggatgcctcggttaacgcccatatc
gagcagatgcgactttcggcgacgaaagccttgttggagcgcaaggatgtcgtcttgatt
gcctctgtatcggcgatttatggccttggcgatcccgattcatatttaaagatgttattg
cacctacgccagggcgataccatggggcagcgagatattcttaagcgcttaagtgaactg
caatacacccgcaatgatattgaattgcagcgtggtaccttccgcgttcgtggtgaagtt
atcgatattttccctgcggattctgaccgctacgggattcgggtcgaactctttgatgat
gaaattgagcgcctaagcgaatttgatccgttaacgggacagattgttaaacgtattgct
cgcaccactgtgtatcccaaaacccactatgtgacgccgcgtgaaaaaatccttgaagcg
actgagtctattaagcaagagctgcgcgagcgtaagcagtatctgctcgacaacaataag
ctcatcgaagcgcagcggatccatgagcgggtgcaatacgatatcgagatgatggttgag
ttgggttattgctccggcattgagaactactcccgctatttgtcgggacgggcgccggga
gaagggccaccaaccttgctggattatttacccgccgatggtttgttgatcatcgacgag
tcccacgtcactgtgccgcaaattggtgctatgtataagggcgatcgttcccgtaaaacc
actttggttgaatacggcttccgtttaccctcggcgctagataaccggccgttgaagttc
gaagagtttgagcaattgatgccgcagaccatttatgtgtcggcaacgcctaatccttac
gaactggagaaaagcgacggcgagattgttgaacaagtcgtgcggccaacggggttactc
gatcccgagttggaagttcgcccggtcaacattcaggtggacgatttactctccgaggtc
gccaaacgtgtcgccgtcaacgagcgggtgcttgtcaccactctaaccaagcgcatgtcg
gaggatttaaccgaatacctcgatgagcatggcgtcaaagtccgttatttgcattcggat
atcgataccgtggagcgggtggagatcattcgcgatcttcgcctcggtaagtttgatgtg
ttggtcggtatcaacttgctgcgtgaaggtttagacatgcccgaagtttccttagtctgt
attctcgatgcggataaggaaggctttttacgttcggagcgttcgcttattcagaccata
ggtcgcgccgcgcgtaacgtcaatggcaaggttatcctctatgcggataggatcactcag
tcgatggccaaggcgatgggagaaactgagcgccgccgtgagaaacagcgcgcctacaat
cttgagcacggcattgttcctaaaggggtggtgaaacgcattaccgacgtaatggatgtc
gatgatggtagagagtctgaaaaaggttatcgtcagtcatcactggataaagtggctgaa
cctaaagccaaacgttatcaagccgatgcggcgcagctgagccatgatatcgacaagctc
gagaagcaaatgcatgaacatgcgcgtaacttggagtttgaagaggcagcggcgctacgc
gatgaggtgaaacggttacgggagttgctgatcaccgcctaa
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