Shewanella sp. MR-7: Shewmr7_1995
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Entry
Shewmr7_1995 CDS
T00389
Name
(GenBank) L-arabinose isomerase
KO
K01804
L-arabinose isomerase [EC:
5.3.1.4
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00040
Pentose and glucuronate interconversions
shm00052
Galactose metabolism
shm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Shewmr7_1995
00052 Galactose metabolism
Shewmr7_1995
Enzymes [BR:
shm01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.4 L-arabinose isomerase
Shewmr7_1995
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Gene cluster
GFIT
Motif
Pfam:
AraA_N
AraA_central
Arabinose_Iso_C
Motif
Other DBs
NCBI-ProteinID:
ABI42984
UniProt:
Q0HV71
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Position
complement(2359095..2360597)
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AA seq
500 aa
AA seq
DB search
MKAFKQKQVWFITGSQDLYGPKVLEQVAKNSEQIVHGFNESSAISIEVVYKPTVKSPREI
HAVCQAANSDENCVGVILWMHTFSPAKMWIAGLNELSKPFMHLHTQFNAELPWSEINMNY
MNTHQSAHGCREFGFIGTRMRKERKVVVGHWQSSDVQAQIDDWCRAAAGWHESQNLRIAR
FGDNMRQVAVTEGDKVAAQIQFGYEVHAYSLGELNEAIAAIAEGDVTAQLDRYASEYQVG
NELFGDEYQLDRLRKEAKIELGLTQFLTQGGFGAFTNCFENLTGMTGLPGLATQRLMANG
FGYGGEGDWKTAAMVRIMKVMGQGRAGGTSFMEDYTYNFGATDQVLGAHMLEVCPSIAAA
KPRLEVHRHTIGVRCDVPRLLFTGKAGPAINVSTIDLGNRFRIILNELDTVTPPQDLPNL
PVASALWEPRPNLAVAAAAWIHAGGAHHSAYSQAITTDQIVDFAEMAGAELVIIDADTKI
REFKNELRQNSVYYGLARGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcaaacaaaaacaagtgtggtttatcacgggttcgcaggatttatacggc
ccaaaagtattagagcaagtcgctaaaaacagtgagcaaattgttcatggctttaatgaa
tcatccgccatttccatcgaagtggtgtataagccaaccgtaaaatctccacgggaaatt
catgccgtatgccaagcggccaacagcgatgaaaactgtgttggcgttattctgtggatg
cacactttctctccagccaagatgtggattgctggccttaatgaattaagcaagccattc
atgcacttacacactcagttcaatgccgagctcccttggagtgaaatcaacatgaactac
atgaacacccaccaaagtgctcacggttgccgcgaatttggttttatcggcactcgtatg
cgtaaagagcgcaaagtggttgtgggtcactggcaatcgagcgatgtacaggcacaaatc
gatgattggtgccgcgcggcggcgggttggcacgagagccaaaacctgcgtatcgcccgc
tttggcgacaacatgcgtcaagtggccgtgaccgaaggcgacaaagttgccgcacaaatt
caattcggttacgaagtgcacgcctacagcttaggtgaactcaatgaggcgattgcagcc
attgccgaaggcgatgtgactgcacagctcgaccgttacgccagcgaataccaagtgggt
aacgagctatttggcgatgaataccaattagaccgtttaagaaaagaagccaagattgaa
ctcggcttaacccaattcttaacccaaggcggatttggtgcctttaccaactgcttcgaa
aacctcaccggtatgacaggattaccaggactggctacccaacgtctgatggcgaacggt
ttcggttacggcggtgaaggtgactggaaaacggctgccatggtgcgcatcatgaaggtg
atgggccaaggccgtgccggtggtacttcatttatggaagactacacctataactttggc
gcgactgaccaagttcttggcgcccacatgttagaagtgtgcccatcgattgctgctgca
aaaccgcgtttagaagttcaccgccacaccattggtgtgcgttgtgacgtgccacgtctg
ttattcactggtaaagcaggcccagcaattaacgtatcgactatcgatttaggcaatcgt
ttccgtatcattcttaatgaattagatacagtaacgccaccacaggatctgccaaatctg
cctgtcgcgtctgcgctgtgggagccgcgtccgaatttagcggttgccgccgcagcttgg
atccacgccggtggtgctcaccactcagcttacagccaagctatcacgacggatcagatt
gtcgactttgctgaaatggccggtgctgaactggttatcatcgatgccgacactaagatc
cgtgagtttaagaatgagcttcgccaaaattccgtttattacggtttagcaagaggttta
taa
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