Shewanella sp. MR-7: Shewmr7_2009
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Entry
Shewmr7_2009 CDS
T00389
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shewmr7_2009
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shm01007
]
Shewmr7_2009
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shm03016
]
Shewmr7_2009
Enzymes [BR:
shm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Shewmr7_2009
Amino acid related enzymes [BR:
shm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Shewmr7_2009
Transfer RNA biogenesis [BR:
shm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Shewmr7_2009
Prokaryotic type
Shewmr7_2009
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RNase_Y_N
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
ABI42998
UniProt:
Q0HV57
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All DBs
Position
complement(2370574..2371860)
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AA seq
428 aa
AA seq
DB search
MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ
AKARGEDVDAIMAQVGDLGAQLDAKKVELAAVLEEVNAIAMSMPNLPDESAPIGADETEN
VEIRRWGTPRSFDFPVKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQFM
LDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSM
AALEALTGHAETVLQRLGLPYRTVILCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNM
KDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGSVTIPEALRPY
MGGLTQIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcctaaatttttgcgcaacgaattagcagttaccgctgagcgattagctacc
cgtggttttattttagatgtcgctcatctcactcaattagaagaaaaacgtaagtcactg
caagtggcgactgaagagttacaagcttcgcgtaatgctatttccaagtccatcggacaa
gcaaaagcccgcggcgaagatgtggatgccatcatggcgcaggttggcgatttaggtgcg
caattagatgcgaagaaagtcgagctggctgcggtacttgaagaagtgaacgcgattgcc
atgtcgatgccaaacctgccggatgagtctgcgcctatcggtgctgacgagactgaaaac
gtcgaaatccgtcgttggggcacaccacgcagcttcgattttcctgttaaagatcatatc
gacttaggtgaaggcctaaacggtttagattttaagagcgccgtgaaaatcactggctca
cgctttatcgtcatgaaaggccaaatcgcccgtttaaaccgcgcattaggtcagttcatg
ttagatctgcacactactgagcacggttataccgaagcttacgtgccattactggttaac
gaagcaagcttactgggtactggccaattgcctaagtttggtgaagatttgttccacact
aaacctgcgaccgaagaaggccaaggtttaagcctgatcccaaccgctgaagtgccatta
acgaacttagtgcgtgacagcattgtcgatgaagacgaattaccgattaagttaaccgcg
cataccgcctgtttccgcagtgaagctggctcatacggtaaagatacccgtggtcttatc
cgtcagcaccaattcgataaagtggaattagtgcaactggttaagccagaagactcaatg
gcggcgctcgaagcattaacgggccacgctgaaaccgtactgcaacgcctcggtctgcca
taccgcacagtgatcctgtgtaccggtgatatgggctttggttcaagcaaaacctacgat
atcgaagtgtggttaccaggccaaaacacttaccgcgagatttcttcatgttcaaacatg
aaagacttccaagcccgtcgtatgcaagcccgttaccgcgttaaggccgataacaagcca
gccttgctgcacaccttaaacggctcaggcctagcggtaggtcgtactttagttgcgatt
ttagagaactatcaaaatgccgatggtagcgtgaccattccagaagctctgcgtccatac
atgggcggactgactcagatcggttaa
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