Shewanella sp. MR-7: Shewmr7_2059
Help
Entry
Shewmr7_2059 CDS
T00389
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shm03032
]
Shewmr7_2059
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_2059
Enzymes [BR:
shm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Shewmr7_2059
DNA replication proteins [BR:
shm03032
]
Prokaryotic type
DNA Topoisomerases
Shewmr7_2059
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Shewmr7_2059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ABI43047
UniProt:
Q0HV08
LinkDB
All DBs
Position
complement(2427351..2430185)
Genome browser
AA seq
944 aa
AA seq
DB search
MPNHVFGPLNDTDYALSANFQGNEQFMTDLASSISPINIEDELKNSYLDYAMSVIVGRAL
PDVRDGLKPVHRRVLFAMSELKNDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQ
PFSLRYTLVDGQGNFGSVDGDSAAAMRYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQ
IPAVLPTRVPNLLINGSSGIAVGMATNIPPHNLTEVVKGCLALIADPALSIEQLMEHIPG
PDFPTAAIINGRKGIIDAYKTGRGRAVMRALAEVETEDNGRERIIVTEIPYQVNKAKLIE
KIAELVKDKKIEGISGLRDESDKDGMRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMV
ALTNGQPKLFNLKEMLECFILHRREVVTRRTVFELRKARERAHILEALAVALANIDPIIA
LIKASPTPADAKVKLVEQGWALGHVQGMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQA
QAILELRLHRLTGLEHDKIIAEYEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYGD
ARRTVINANEIDMSLEDLINEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDE
DFVEKLLVANTHDTILCFSDFGKMYWLKVYQLPLASRTSRGRPIVNLLPLSDGERITAIL
PVREYAEDKYIIMATSNGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIM
LFSNEGKVVRFKEGEEVAVLDENGNPVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQ
KVVSLIVPKGDGAILTVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVG
GNDEIMLISDKGTLVRTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVE
LDENGMPIVPVVAEGDSVHEEPLEEELEEELDEDEELDDEQDED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcacgtttttgggccgctcaatgatacggattatgcgttgtcggctaatttt
caggggaacgagcagtttatgactgatctggcatcatctatttcgccaattaatatcgaa
gacgaactaaagaattcgtaccttgattacgccatgagcgtcatcgtgggacgtgcatta
ccagacgtgcgtgatggcctcaagcctgtgcatcgccgcgtgctgtttgccatgagtgaa
ttgaagaacgattggaacaagccgtacaaaaagtctgcccgtgtggttggtgacgtgatc
ggtaaatatcacccccatggtgattcggcggtttacgatactattgtacgtatggctcag
cctttctctctgcgttacaccttagtcgatggtcaaggaaacttcggttcggttgacggc
gactccgcagcggcaatgcgttataccgaaatccgtatggacaagttagcgcaccagctc
ctcgccgatcttgaaaaagaaaccgttgactatgtgccaaactacgacggcactgaacaa
attcctgcggtattaccgacacgtgtccctaacctgttaatcaacggttcatcgggtatt
gcggtaggtatggcgactaacattccgccccataacttaaccgaagtcgttaagggctgt
ttagcgctgatcgccgatcctgcgctgtctattgaacagctgatggaacatattccggga
cctgacttcccaacggctgcgattatcaatggccgtaaaggcattatcgatgcctataaa
acaggccgtggccgtgctgtcatgcgcgcgctggctgaagtcgaaactgaagacaacggc
cgtgaacgcattatcgtcaccgaaatcccttatcaggtgaacaaagcgaaactcatcgag
aaaatcgctgagctagttaaagataagaagattgaaggtattagcggcctgcgcgatgag
tctgacaaagacggtatgcgcatcgttatcgaaatcaaacgcggtgaagtgggtgaagtt
gtcctgaacaatctctatgcccagacacagatgcaatgttcttttggtatcaacatggtg
gcattgaccaatggtcagcctaagttgttcaacttaaaagaaatgctcgagtgctttatt
cttcaccgccgtgaagtagtaacacgccgcactgtattcgaactgcgtaaagcgcgagaa
cgcgcccatattcttgaggcattagcggttgcgctggccaacatcgacccgattattgcg
ctgatcaaagcttcgccaacgccagcagacgctaaagtcaaactggttgagcagggctgg
gcacttggccatgtacagggcatgcttgaaaaagcgggtgacgatgcggcgcgtcctgaa
tggttagagccagaattcggtatccgtgatggcttatattacctgactgagcaacaggct
caggcgattctagagctgcgtttacaccgtttaactggtcttgagcacgataagatcatc
gccgaatacgaagaactgctcgagttcatcgcgggtctgctgtttattctgcgcagccct
gagcgtttgatggaagtgatcaaagaagagctagaagaaattcttgctgaatacggtgat
gctcgccgcactgtcatcaacgccaatgaaattgatatgagtcttgaagacttaatcaac
gaagaagacgtggttgtgaccctttcgcacttaggttacgccaagtatcaaccgctgagc
gattatcaagcccagcgccgtggtggtaagggtaaagccgcaactaaagtgaaagacgaa
gatttcgttgaaaaactgctggttgccaacactcacgataccattttgtgcttctcagat
ttcggtaagatgtactggctcaaggtctatcaattaccgctggcgagccgtacttcccgt
ggtcgtccgattgttaacttactgccgctgtccgatggtgaacgcattactgcgattctg
ccagtgcgtgaatacgcagaggataagtacatcatcatggcgacctctaacggtaccgtg
aagaagactgcgctgacagcttacagcaacccacgtgctaacggcattatcgccgtgaac
ctgaaagacggtgaccaactgatcggtgtcgatatcaccaatggtgatgatgagatcatg
ctgttctcgaacgaaggtaaagtggttcgctttaaagaaggcgaagaagtcgccgtactc
gatgaaaacggcaacccagtgctggatgaagaaggcaacccacaaatcaacttcaagggc
gtgcgtccaatgggtcgcggcgcgaccggtgttcgcggtatcaagctcgaagaagggcaa
aaagtggtgtctctcatcgtacctaagggcgatggcgctatcttaaccgtgaccgaaaac
ggttacggtaaacgtactgagctgtctgaatacccatctaagagccgcgcgaccaaaggt
gtggtatcgatcaaggtgagtgagcgtaacggtgcggttgttggcgcggtacaagttggc
ggcaatgacgaaatcatgctgatcagcgacaaaggtaccttagtgcgtacgccagcgaac
ggtgtgtctatcatcggccgtaacacccaaggtgtgaccattatccgtaccgcaagtgat
gagaaagtggttggtctgcaacgtatcgatgagatccaaggcgacgaagatgaagtcgag
ctggatgaaaacggtatgccaatcgtcccagttgtcgctgaaggtgactctgttcatgaa
gagcctttagaagaggaactggaagaagaattagacgaagacgaagagcttgacgacgag
caagacgaagactaa
DBGET
integrated database retrieval system
