Shewanella sp. MR-7: Shewmr7_2119
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Entry
Shewmr7_2119 CDS
T00389
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shm02000
]
Shewmr7_2119
Transporters [BR:
shm02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr7_2119
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABI43107
UniProt:
Q0HUU8
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Position
2506828..2509500
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AA seq
890 aa
AA seq
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MTTQTTVARAVRFSLLALVSASVTPQVFAADEAAVIDDKVERIEVTGSRIKRTDLENASP
IVVVSAADIEKGGFNSVQDVLGNLSQNSGGSMTQQEVHGFTPAASAVNLRGVGAGRVLTL
INGKRVPKYPFGAGGTDSFVDTANIPLGAIERIEILTTGASAIYGSDAMGGVINIILKKD
VEQSTFKYRHSDTFDGGLQNSQFSFMTGVSSDKANLTFFAEYEDRQALKASDRPEWGTDI
IPGNYYAGYSSYGANLVDSNGKLLKSLSAAECDARGYVMMSNGKCGFDRSAQRDFSPEQT
RYSTMINLTKDLNDNHQLYSRLDYTHASTYTEIESATVGDDFMFNVSGDNVTIVDELNGL
SQVFDKNTAFGGDFAGAADGDYYYTRRMSELGPRTSDFETNNFSFLLGSKGYLTDTIEYD
TSWSIARQTVDSTTAGSPTYQSMWNYLTAGTNGNSLLDVISPDDAAMLDFQGGKKGQSTL
SSFNAGISGDAFELPAGTVAYAVGVEYGKEWFYDKSDSFTSNGGVIGKGGSSAQGEREQY
AGYAEVAVPVIENLTVTLAGRYDYYDDLSDVGGQFSPQVAVEYRPIDNLLLRGLYAETFR
APDMQRLFGEPTAAYSTVIDTPTCEAAGGTGPACEKIDSLPITIGANPELEAETGKNYNL
GMVWDYNDLNLTLDYWIVEIDNLVNSPSAQYILDHSDAFADKIFRDASGKLIQVNTQAIN
MSSQETSGIDFSVGYRYETSGYGDVTARLEGTYLLKWEEQLTPDSEPLDLIDGDDSAPQI
RGNLNLGWNYDDFATNLLIKYTDSMNGQRKEAFINNGLADKYAVTIDSHVEVNWAASYML
TDAIKFSGGINNIFDAGPEIDETQNSWPHYPRSYYNVVGREYYLAVEMNF
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcaaacaaccgtggcgcgtgcggttcgttttagtttactcgctttagtctcc
gcctcggtgacaccgcaagtatttgccgccgatgaagcggccgttatcgatgataaagtg
gagcgtattgaggttacgggttcacgtattaaacgtaccgatcttgaaaatgcctcccct
atcgtggtggtgagcgccgcagatatcgaaaaaggcggctttaactcagtgcaagacgtg
ttaggcaacctgtcgcaaaactccggtgggtcgatgactcaacaggaagtgcacggcttt
accccagcagcatctgccgtcaaccttcgtggtgtgggcgctggacgtgtgctgacgctg
atcaacggtaaacgtgtgcctaaatatccctttggcgccggtggcaccgacagctttgtc
gacaccgccaacattccgttaggggcgattgagcgtattgaaattttaaccacgggtgcc
tcggccatttacggctccgatgcgatgggcggtgtaatcaacatcatcttgaaaaaagac
gttgagcaaagcaccttcaaataccgccactcagataccttcgatggcggcctgcagaac
agccagttctcctttatgacgggtgtcagcagcgataaagcgaatctgactttcttcgcc
gaatatgaagatcgccaagcattaaaagcctcagatcgccctgaatggggcactgatatt
atcccgggtaactattatgctggttacagctcctatggcgccaaccttgtggatagcaat
ggcaaactactcaagagcttaagtgccgccgaatgtgatgcacgcggctatgtgatgatg
tccaatggcaaatgtggtttcgatcgctccgcacagcgcgacttttcgcctgagcaaacg
cgctactccaccatgattaacctcaccaaagacttaaacgacaatcatcagctgtattcg
cgtctcgattacacccatgcctcgacctacacagaaattgaatcggccactgtgggcgac
gattttatgtttaacgtgtcgggcgataacgtcactatcgtcgatgagctcaatggctta
tcccaagtgttcgataaaaataccgccttcggcggagattttgccggcgctgccgatggg
gactattactacactcgccgtatgtctgagttaggtccacgcacctctgattttgagacc
aataacttctccttcttattaggtagcaaaggttacctcactgatactatcgagtacgac
acctcgtggtcgattgcgcgtcaaacggtagactctaccaccgcaggttcgccaacctac
caaagcatgtggaactacctcaccgcgggtactaacggcaattcgttactggatgtgatt
tcaccggacgatgccgcaatgctggacttccaaggcggtaaaaaggggcaatccacccta
tcgagctttaacgcagggatcagtggcgatgcctttgaattaccagcaggaacagtagct
tatgccgtgggcgtcgaatacggtaaagaatggttctacgataagtccgatagcttcacc
agcaatggtggcgtgattggtaaaggcggcagtagcgctcaaggtgaacgtgagcaatac
gcaggttatgccgaagtcgccgtgcctgtgatcgaaaacctcaccgttactcttgcgggc
cgttacgactactatgacgatttatccgatgtcggcggtcaattcagcccacaagtcgca
gtcgagtatcgcccgattgataatctgttgttacgcggtctgtatgcagaaaccttccga
gcgccagacatgcagcgcttatttggtgaaccaacggcagcctatagcacagtgatcgac
actccaacctgtgaggccgcgggtggcacgggccctgcctgtgagaagattgactcactg
ccaattactatcggtgcaaacccagaacttgaagcggaaaccggtaaaaactataacctc
ggcatggtgtgggattataacgatctcaatttaaccttggactactggattgttgaaatc
gataacctagtcaatagcccaagcgcccagtatatcttggatcactctgacgccttcgcc
gataagattttccgcgatgcaagcggcaagttaattcaagtgaatactcaagccatcaac
atgtcatcccaagaaacttcgggtatcgacttctcggtgggctatcgctatgagacttca
ggctacggcgatgtcaccgcccgcttggaaggcacctatttgctgaagtgggaagagcaa
ttaaccccagattctgagcctttagatctgatcgatggtgacgactctgccccgcaaatc
cgcggtaacttaaatctgggttggaactacgatgacttcgctaccaacctgctgatcaag
tacaccgacagcatgaatggtcagcgtaaagaggcattcattaacaatggcttggcggat
aaatatgccgtcactatcgacagccatgtcgaagtgaactgggccgccagctatatgtta
accgatgcgattaagttctccggcgggattaataatatcttcgatgcaggccctgagatt
gatgaaacccaaaactcttggccgcattacccacgttcttactacaacgttgttgggcgt
gaatattatttagcggtagagatgaacttctaa
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