Shewanella sp. MR-7: Shewmr7_2142
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Entry
Shewmr7_2142 CDS
T00389
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shm02000
]
Shewmr7_2142
Transporters [BR:
shm02000
]
Other transporters
Pores ion channels [TC:
1
]
Shewmr7_2142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABI43130
UniProt:
Q0HUS5
LinkDB
All DBs
Position
2533309..2537505
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AA seq
1398 aa
AA seq
DB search
MSQPPIHEPNAPAQQENQTPEQLSLEQNPTCVQPKTLKLRIWQIFKLCTRIIVYVPLSLL
VLTALLLGTEIGSRISVGLADKFVPDLALSYTSGSLNKDLTLAHASWSMDGIKVELKDLH
LAWQPTCLLQKQLCVNALTASQVDVNINTNALGAGGAEVDVPPENDQPSELVLPFGIKLD
SAELNNINIAVDKMRFSANHIQTAATWFAEGLTVEQLSSEGLAVLIPIDDSPTATESKVA
DTTTTAETTTTVAVTASAKTTTGKPIADKGSTAQTPANTQADKQTDSNAEKQASTEEWAL
AHLPQVFMPFPVDVKHLSLDNSRLQIGPREDLFSHIELQGQFAKYQLTLEKLMLAHSYGE
LSVVGQLALKQDYPLALEVQANMTQVAELPELTHQQLSLTLSQSVGQLGIHALAKGDVDF
SLNGQLTLKDPTLPYKVKLEKVRAQWPLQHAEYLVSDLNLDSQGSLTQQAATLNGNVITP
FHKVLAISSELHHQGAKLDIKQFNAKGELGSVNVTGELDYAKAITWKAKVLLDNLKLQEI
TLPQTAQTPESTPTKDAKAPSTNTDKPAPATANAPAPATTTAAATTNAKASASATSSLPN
SLISGQLQTTGRLLDKQWQVALTDTQLSGTMQGYPFDITADVSINDKLYISAKGVNAKVL
GSTLTLAGETNKTWNLEGKLQVPDFGLWLPQASGQLQADINVTGEEKHPQVELTAQLVDL
VHQNIKLRESTLKAYYKPLDAHEFALSLKSKALQLGSQSLDTVTLGSKGDIQNQKLTLSA
TGDLGLELGVTSQYDMKKSQLQAQVNKINLATPVGRWEIDKDILVGWDQNKSKGNISPFC
LVNPNSKVCLDNQVTIGKTGEAQLSYAGNLGKLLVPVLPNNMQWDGSSSLLANVAWAAGR
KPTANVDFNFTPGSIKLKRAKNREVTINYQQLDFKANLDAKRLLSSISFESEDVASWQSE
VTVNVTPDRTLSGYANIKQINLQPLGEFFPQLNTLEGLLTSRLNFAGTLDAPEVSGNVSL
TQGALALTANPTLINKIDMSMELGGQQASLKGRWMMGNGLGRVTGDMRWPQGQFSGELAV
KGDKLAVIQPPLALLDVSPDLTIAFSSQQLEVKGVVDVPSGNIKIVQLAEGGVALSEDVV
FDDSIAAAQPKANPYAIVADLNINVGNDLKVDGMGLKGKLQGTLKLQQQAFRPPLLFGDI
KVKQGSYKFMGQTLKIRTGEVQFVGPTSVPNLNIEAIREIKSEDLVAGVRVTGTPARPVV
TLFSNPAKEQAEILSYIIKGSGFNSSNNEQNNSLMMGAALGLGSQVGGGGAINNIGSTAA
GIIEEFGFSNVQLDTNDEGRVAISGFIGDNLMVKYGVGVFNPGYEMTVRYYLLSQLYLET
VSGTLGQSLDIYYNFNIK
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagccccctattcatgagcctaatgcaccggctcaacaagagaatcaaacgcct
gagcaattgtctttggaacaaaatccaacgtgtgtgcagcctaaaacccttaagctgcgc
atttggcaaatatttaaactctgcacgcggattattgtttacgttcccttgagtcttttg
gtgttaactgcattactgctcgggactgaaattggctcgcggataagtgtgggtttagcc
gataagtttgtacccgatctggcgctcagctacacctcgggctccttaaataaagatctc
accttagcccacgccagctggtcgatggatgggattaaggttgagctcaaggatttgcat
ttggcgtggcaacccacttgtctgctacaaaaacagctgtgcgtgaatgccttaacggcg
agccaagtcgatgtcaatatcaatacaaatgccttaggcgcaggcggcgctgaagtcgac
gtccctcccgaaaatgatcagccgagtgaactggttctaccctttggtataaagctcgac
agcgccgaactgaataacatcaatatcgcggtcgataagatgcgcttttcggcaaatcat
attcagaccgccgccacttggttcgccgaaggactgacggtcgagcagcttagcagtgaa
ggcttggctgtgttaattcctatcgacgatagcccaacggctacagagtctaaggttgcg
gacacgacgactacggcagaaaccacgaccaccgtagcggtgacagcaagcgctaaaacg
acaactggtaagcccattgcagataagggatctacggcgcaaacgccagctaatactcaa
gctgataaacaaacggattcaaacgcggaaaagcaagcatccactgaagaatgggcactt
gcccatttaccacaggtttttatgcctttcccggtggatgtaaagcatctcagtttagac
aacagccgtttacagattggtccgcgtgaagatctgtttagccatatcgagcttcaaggt
caatttgccaagtatcaactgacccttgagaaattaatgctcgcccatagttatggtgag
ctatcagtggtgggccaactcgccctcaagcaagattatcccctcgcgctcgaggttcag
gccaatatgactcaagttgcagaactgccagaactgacccatcaacaattaagcctaacc
cttagccaaagcgtcggacagctcgggatccatgcccttgccaaaggggatgtggatttt
agtctcaatggacaattgaccctcaaagatcccacgctgccctacaaggtcaaactggaa
aaagtgcgcgcacagtggccgctgcaacatgccgagtatctcgtcagcgacctcaatctc
gacagccaaggctccctcactcaacaggccgcgacgctcaatggaaatgtcatcacacct
ttccataaagtgttagccattagcagtgagcttcatcatcagggtgcaaagctcgatatt
aagcagtttaatgccaagggcgaactaggttcggtcaatgtgactggtgagctagattac
gctaaggcgatcacttggaaagccaaggtactgctggataacctgaaattacaggaaatc
actctgccacaaactgcacagactcctgaatcaacaccgacaaaggacgctaaagcgccg
agcacaaataccgataagccggcgcctgccacagcaaatgctccagctcctgcgacaaca
accgcagctgcaactacaaatgcaaaagcaagtgcaagtgcaacgagcagcttgccaaac
agtttaatctcaggccaattgcagaccaccgggcgcctgttagataaacagtggcaagtg
gcgctaacggacacccaactgtcaggcacaatgcagggttatccgtttgatatcacagcc
gatgtcagcatcaacgataaactgtatatcagcgcaaaaggtgtcaatgccaaagtactc
ggctctaccttaaccctagcaggcgaaaccaacaaaacctggaaccttgagggtaaactg
caagtccccgatttcggtttatggttgccccaagccagtggtcaattgcaggccgatatc
aatgtcactggggaagagaaacatccacaagtcgagttaaccgcgcaattggtcgatctg
gtgcatcaaaatattaagctcagggagtcaacactcaaggcttactataagcctttggat
gcccatgagtttgccctatcactcaagtcaaaggcgctgcaacttggctcacagagttta
gataccgtaaccttgggcagtaagggcgatattcaaaaccaaaaactcaccctcagtgcc
acaggggatcttgggctcgagcttggcgtcactagccaatacgatatgaaaaaatcccaa
ctgcaggcgcaggtgaataaaatcaacttggcaacccccgtcggacgttgggagattgat
aaggatattcttgtcggctgggatcaaaataagtccaaaggtaatatcagccctttctgt
ctagtgaatcctaacagtaaggtttgcctcgataatcaagtaaccattggtaaaactggc
gaggcccagctcagttatgcgggcaatctgggtaaactgttagtacctgtgttgccgaac
aatatgcaatgggatggcagttcttcgctgctggcaaacgttgcctgggccgctgggcgt
aaacccacggccaatgtcgactttaattttactcccggtagtatcaagcttaaacgagcc
aaaaaccgtgaagtcaccattaattatcaacaacttgatttcaaagctaacttagatgct
aaacgactcctctcgtcgattagctttgaatcggaagatgtcgccagttggcagagtgag
gtcacggtcaacgtgacgccagacagaaccttgtcgggttacgccaatatcaagcaaatt
aacctgcaacccttgggcgagtttttcccacagctcaataccctcgaaggcttgctgacc
agcagattaaactttgcaggcaccttggatgcgccagaagtgtcgggcaatgtgtcctta
acccaaggcgcacttgcactgactgcaaacccgaccctcatcaataaaattgatatgtcg
atggagcttggcggacaacaggcctccctcaaaggtcgttggatgatgggcaatggttta
ggccgagtcacgggcgatatgcgctggcctcagggccaatttagtggtgagcttgcggtg
aaaggcgacaaattagccgtgatccaaccgccactggcgctacttgatgtctcgcccgat
ctcaccatcgcctttagcagccaacagcttgaggtcaaaggggttgtcgatgtgccttcg
ggcaatatcaaaattgtccagctcgccgaaggcggcgttgccctgtcggaagatgtggta
ttcgatgactcaatcgcggcggctcagcccaaggctaacccctatgcaatcgtcgcggat
ctgaatattaatgtcggtaacgacttaaaagtcgatggcatgggccttaaaggtaaactg
caagggaccttaaaactgcagcaacaggcgttccgtccgccactgttgtttggtgatatc
aaggtcaaacaaggcagctataagtttatgggacaaaccctgaaaatccgtaccggtgaa
gtgcagtttgtaggaccaacttccgtccctaacttaaatatcgaagctattcgtgaaatt
aagagtgaagatctggtcgcgggggtccgtgtcacaggcacacctgcccgccccgttgtc
accctattctcaaaccctgccaaggagcaagcagagatcctgtcttacattattaaaggc
agcggctttaacagcagcaataacgaacagaataattcccttatgatgggcgcagcacta
ggtttgggctcacaggttggtggcggtggcgccatcaataatattggcagcacagccgct
gggattatcgaagagttcggtttctcaaacgtacaactggatactaacgatgagggccgc
gtggcgatcagtggctttatcggtgataacctgatggtgaaatatggcgtcggggtattt
aacccaggctatgagatgacagtcagatactatctgttatcgcaactctatcttgaaacg
gtatccggcaccctaggccaatccctcgatatctactacaacttcaatatcaagtaa
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