Shewanella sp. MR-7: Shewmr7_2146
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Entry
Shewmr7_2146 CDS
T00389
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shm01002
]
Shewmr7_2146
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shm01011
]
Shewmr7_2146
Peptidases and inhibitors [BR:
shm01002
]
Cysteine peptidases
Family C82
Shewmr7_2146
Peptidoglycan biosynthesis and degradation proteins [BR:
shm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Shewmr7_2146
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABI43134
UniProt:
Q0HUS1
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All DBs
Position
complement(2539270..2540946)
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AA seq
558 aa
AA seq
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MMPVSRLALNPNTPDRSFRSSKRWPLGALLMGLSLAVIESYAAESLVTAPLRVEAETVEQ
PVLTPPTEIADPDTSVEQILGQTLLLSLADVSPVFSANYQQLIKWQHRVLDSEERTKLRQ
MQLQLDNYWQYLDTQAECITPCRSAALMPTDAYFRAVVLKLKQLMALAESSSWETLILED
KLSPGQESPLIAPIAQRLFLLGFLAEMPSTASESVVDKAALPVSELGSEPVIKSDIISPE
ATNQAETVARTEQAATDNNPMRYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYA
RAKLLAKNTLRLQIFTRTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLS
SHISSVVVNPQWRVPRTIVRRDILPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELA
SSHFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVE
ELARWFQTHLVKDTRLWDKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIY
HLEAEFSQAVPASIFYIL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgtgagtcgattagcgctaaatcctaatacaccagaccgcagctttcgttca
tctaagcgctggccactcggcgcattgttgatgggactttcgcttgcagtcatagaatcc
tatgccgccgagtcactcgtaacagcacctttacgcgttgaagcagaaacggttgagcag
cccgttctgacgcctcccactgaaatcgctgacccagacacctcagttgagcaaatccta
gggcaaaccctactcttgagtcttgccgatgttagcccggtttttagcgccaattatcaa
caattgattaagtggcagcatagagtactggatagcgaagagcggacgaagcttcgccaa
atgcagctgcaactggataattattggcagtatctcgatacccaagctgaatgcatcacg
ccgtgcagatcggcagcactgatgccaacagatgcgtattttcgcgctgtggttctcaag
ctgaagcaattgatggcgttagcggaatcctcttcgtgggagacgctcatcctcgaagat
aagctcagtccagggcaagagagtccactcattgcgccgattgcacagcgccttttccta
ttaggttttctagcagagatgcctagcacggcttccgagtcagtagtcgataaagcagct
ttgccagtatctgagctaggatctgagccagtcattaagtcagacatcatttcaccagaa
gcaacaaatcaagctgaaacagttgcacggactgagcaggctgcaactgataacaatccc
atgcgttatgatgatgaactggttcgcgcgatcaaaaactttcaaacccagcatggctta
caagcagatggggtgataggtaagcagaccctgtattggctcaatcaatctccctatgct
cgggcaaagctgctggcgaaaaatacccttaggctgcagatttttactcgcaccttacct
gcgagctatctggtgataaacatccctgcatttgagttgcaattcgtcgaagcggggaag
gttatcctcaattcaaaagtaatagtgggcaaagcatcgcggccaacaccgctgctaagt
agtcatatctccagcgtggtggtcaatccacagtggcgcgtgccacgcaccatagtgcgg
cgcgatatcttgccccatatacgccaagatggtcattacctgcaggaccgcgggttcgat
gtttacgactatgacggcgcgcgagtcgaacattcgccacaggagtggcaagagttggcg
tccagccattttccctatcgtttagtgcaacgccccggggcgaaaaacgccttaggtcgg
tataaatttcatttcgacaacagttttagtgtgtatttgcacggaacttctgagccaagt
ctctttaaaaagaccgatagggccttatcatcgggttgcattcgggttgaaaaggtcgag
gagctggcccgctggtttcagactcacttagttaaagatacgcgcctttgggacaaatta
acgcctaataccactcaatcccaatggtttgcgttatcagataccatgcctgtctacacg
gtttattggacagcatggcttgatgatgctgggcaaattcaatatcgcaatgatatttat
cacttagaagctgagtttagccaggcggtgcctgcatcaattttttacattctataa
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