Shewanella sp. MR-7: Shewmr7_2168
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Entry
Shewmr7_2168 CDS
T00389
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shewmr7_2168
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shm01007
]
Shewmr7_2168
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shm03016
]
Shewmr7_2168
Enzymes [BR:
shm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Shewmr7_2168
Amino acid related enzymes [BR:
shm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Shewmr7_2168
Transfer RNA biogenesis [BR:
shm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Shewmr7_2168
Prokaryotic type
Shewmr7_2168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
WHD_MCM7
Motif
Other DBs
NCBI-ProteinID:
ABI43156
UniProt:
Q0HUP9
LinkDB
All DBs
Position
complement(2564920..2567307)
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFNGVVIGEVVECGQHPDAD
KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLC
SYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREVG
VLNRAAVTEPQWQAVTPTIDAKVAINVKETAACPRYLGRVVKNVNVKAATPLWMQEKLRR
SGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKVTLLDGSEVTIPSD
TLVIADDARPLALAGVFGGEYSGVSDSTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
ERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLDKILGHH
VPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
ASLRMSDHKETDLSLKRVRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLPNPISSE
MSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDINAESGVRQQAMLGCVITGLQ
NDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSALHPGQCAEILRNDRVIG
HIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVDS
VVSALKTEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgaatcttggcttcgtgagtgggtcaatcctgccgttagccgtgaagca
ttatcccaccagatcactatggctggcctcgaagtcgatggcgttgatgccgtggctgcc
gagttcaacggcgttgtgattggtgaagtggtcgaatgtggccagcatccagatgcagat
aaactgcgcgtgactaaagtcagtgtcggcagtggtgaacttatcgatatcgtctgcggc
gcaccaaactgccgtcaaggcctgcgcgttgctgttgccatggttggggctgtactgcca
ggcgattttaaaattaaaaaggctaagctgcgtggtatgccatcagaaggcatgctgtgt
tcttacagcgagctagggatcgacatcgacagcgatggcattatcgaactgccattagat
gcgccattaggcacggatttacgtgagtatctccagcttgatgatgctgtgattgaagtg
gatttaaccgctaaccgtgccgactgtttaggcatggtgggtctggcccgtgaagtcggc
gtgttaaaccgtgctgctgtgactgagccacaatggcaagccgttacgccaacgattgat
gccaaagtggctatcaatgtgaaggaaaccgcagcttgcccacgctacttaggtcgtgtg
gtgaagaatgtgaacgtgaaagcggccacgccattatggatgcaggaaaaactgcgtcgc
agcggtattcgttctatcgatcctatcgtcgatatcactaacttcgtgttagttgaattc
ggtcaacctatgcatgcgttcgatcttgccaaactcactggcgatatccaagtgcgttta
ggcaatggcgaagagaaagtcaccctgctcgatggcagcgaagtcaccattccaagcgac
actttagtgattgccgacgatgctcgcccattagcgcttgctggcgtatttggtggcgaa
tattcgggtgtgagtgacagcacgcaagacattctgctggaatgtgccttcttcgcaccg
ttagcgattatgggtaaatcacgccgtttaggtctgcatactgattcatcacaccgtttc
gagcgtggtgttgaccctgagatgcagcataaggttatggaccgtgcgactcgcttagtg
ctggatatttgcggcggggaagcgggccctgtggttgaagccaaatctgacgctgactta
ccaaagcctgcgcaaatcttattgcgtcgcagcaagttagataaaattctgggtcaccat
gttcccgatagcgacgtggttgaaatcctcgagcgtttaggtttcggcgtggttgcaggc
gaaggtagctggcaggtcacaaccgccacttaccgcttcgatatggcgattgaagaagac
ttaatcgaagaagtcgcccgtatctacggttacaacaacattccaaacgttgcgcctgtg
gcgtcactgcggatgtcagatcataaagaaaccgacttaagcctcaagcgtgtacgttcg
ctgttagtggcccgtggtttccaagaagctgtgacttacagtttcgtcgatcctaagctg
caaaatctggttcacccaggtgagcaagcaatggtgttaccgaacccaatttccagcgaa
atgtcggccatgcgtttgtcgatgttcacaggattattgactgcggttggctacaaccaa
agtcgtcaacagggccgtgtgagactttttgaaactggcctgcgctttgttcctgatatt
aatgcagaatcgggtgtaagacagcaagctatgctcggttgcgtcataactggcctccaa
aatgacgaacattgggctatggaatcgaaaactgttgattttttcgaccttaaaggcgat
ttagaagcaattatcggcttgacagtttccgcatcagaatttagctttagagtagcaacg
cattctgctcttcatccagggcaatgtgctgaaatattgagaaatgatcgagtgatcggt
catataggtgctatccatcctagtttggagaagccttttggactcaatggtaaaaccatc
gtttttgagttggaattggatgctttattgcataccagtttaccgctagcccaagctgta
tctaagttcccggctaatcgtcgtgacatcgcagtagtcgtagatgaaagtgtatctgca
ggcgatgtaatgaaattgataagaaaagttggcgaaaatcagttggttggcataaacttg
ttcgatgtatacttaggtaaaggtgttgagcccggcaagaagagcttggcgatagcactt
acattacaagacactactcgtacacttgaggaaaaagagatcgctgagacagtagattca
gttgtttctgccctgaagaccgagttcaacgcatcgttgagggattaa
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