Shewanella sp. MR-7: Shewmr7_2397
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Entry
Shewmr7_2397 CDS
T00389
Name
(GenBank) 3-methylcrotonoyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00280
Valine, leucine and isoleucine degradation
shm01100
Metabolic pathways
Module
shm_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shewmr7_2397
Enzymes [BR:
shm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Shewmr7_2397
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
BT_MCC_alpha
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RimK
HlyD_D23
ATP-grasp_3
ATPgrasp_ST
GARS_A
GCV_H
APO_RNA-bind
Motif
Other DBs
NCBI-ProteinID:
ABI43383
UniProt:
Q0HU22
LinkDB
All DBs
Position
2838775..2840814
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AA seq
679 aa
AA seq
DB search
MLTNSMFTKLLIANRGEIACRIIKTAQAMGVRTVALYSDADKNARHVAMADESFYLGGSA
PADSYLKGDLIIEIAKKAQAQAIHPGYGFLSENADFARKCEAAGIVFVGPGSDAIDAMGS
KSAAKAIMTAAQVPLVPGYHGDDQTDATLKAEALKIGFPMLIKAAYGGGGKGMRIVEHEG
EIMDAINSARREAASSFGNDKLLMERYLRQPRHVEVQVFADTFGNAIYLSDRDCSIQRRH
QKVVEEAPAPGLSDELRAQMGEAAVAAAKAIDYVGAGTVEFLLDTDNSFYFMEMNTRLQV
EHPVTEMVTGQDLVKWQLMVASGQPLPLKQDEVRIHGHAFEVRIYAEDPQNEFLPASGKL
NFLREPEQSKYVRIDSGIRENDVISNFYDPMIAKLIVWDESRPRALQRLVHALESYQISG
LKHNIEFLANIAEHPAFAKADFSTDFINRYGDALIGSASSETDTAIAFAALYQVLARKEA
AKAQAINSADPYSPWGQVSGFRLNSVSQHTIALLDDAHELQQLVLLDFGDHYQLSQATAD
GQVSKSLSGELKQDLLLAEINGHKSKVPVSAQGDDFTLFLPSGSYHFRAVKTQVVEAESS
NEDKLKAPMNGTVVTHLVEVGAEVKSGQGLLVMEAMKMEYTIEAPFDGIVTEFYFKAGEL
VSDGAVLLHVEPKAQSEEA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaacagcatgttcactaagcttttaattgctaaccgtggtgaaattgcctgc
cgcattatcaaaaccgcgcaggccatgggcgttcgcaccgtagccttatattccgatgcc
gataaaaatgcccgccatgttgccatggccgacgaatcgttttacttaggtggcagcgcc
ccggcggattcttacctcaagggcgacttgattattgaaatcgccaaaaaagctcaggcg
caagccattcacccaggttatggcttcttatcggaaaacgccgactttgcccgcaagtgt
gaggcggccggaatcgtgtttgttggcccaggcagcgatgcaatcgatgccatgggtagc
aagagcgcggccaaagccattatgacggcggcgcaagtgcctttagtgccgggttaccat
ggtgacgatcaaaccgatgccaccctcaaggccgaagccttaaaaatcggcttcccgatg
ctgattaaagccgcctacggtggcggtggaaaaggcatgcgtatcgttgagcatgaaggc
gaaatcatggacgccatcaactcggcgcgccgtgaggcggcctcctccttcggtaacgat
aagttattgatggagcgttatttacgccagcctcgccatgtcgaagtccaagtgtttgcc
gatacctttggcaatgcgatttacttatcggatcgcgactgttcgattcagcgccgccat
caaaaagtggtcgaagaagcaccagcccccggtttaagtgatgaactgcgcgcccaaatg
ggtgaagccgccgtagcggccgccaaggccatcgattatgtcggcgcgggaaccgttgaa
ttcctgttagataccgacaatagcttctactttatggagatgaatactcgtctgcaggta
gagcatccggtgaccgaaatggtgacgggccaagacttagtcaaatggcagttaatggtc
gccagtggtcagcctttaccgctcaaacaggacgaagtgcgtatccatggacacgccttt
gaggtgcgtatttacgccgaagatccgcaaaatgagtttttacccgccagcggtaagctc
aacttcctgcgcgagcccgagcaaagcaaatacgtgcgtatcgattccggcatccgtgaa
aacgatgtgatcagtaatttctacgatcctatgatagccaagctcatcgtgtgggatgag
tcgcgtccgcgcgcgctacagcgcctagtgcatgccctcgagtcctaccaaatcagcggg
cttaagcacaatattgaatttttggcgaatattgccgagcatcctgcctttgccaaggcg
gattttagcaccgactttatcaaccgttacggcgacgcgctgattggcagtgcttcgagc
gaaaccgatacagctatcgcttttgccgcgctgtatcaagtacttgcccgtaaagaagcc
gccaaggcacaggcaattaatagcgccgatccttactcgccttggggccaagtcagtggc
tttagactcaacagcgttagccagcatactattgccctgctcgacgatgcccacgagtta
caacaattggtgttattagactttggcgatcactaccagttatcccaagccacagccgac
ggccaagtgagcaagtccctgagtggtgagcttaagcaggatttactgttagccgaaatc
aacggccataagagtaaagtgcccgtcagcgctcagggcgatgattttacgctgttttta
ccctcaggcagttatcacttcagggcggttaaaacccaagtggttgaggccgagtccagc
aatgaagataagctcaaggccccgatgaacggcacagtcgtcacccacttagtggaagtc
ggtgcagaggtgaagtcgggacaagggctactggtgatggaagcgatgaagatggaatac
accatcgaagcgcccttcgacggtattgttaccgagttctacttcaaggcgggcgagtta
gtgagtgatggcgccgtgctgctccatgttgagccaaaagcccagagcgaggaagcctaa
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