Shewanella sp. MR-7: Shewmr7_2492
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Entry
Shewmr7_2492 CDS
T00389
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewmr7_2492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shm02000
]
Shewmr7_2492
Enzymes [BR:
shm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Shewmr7_2492
Transporters [BR:
shm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Shewmr7_2492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
DEAD
AAA_29
AAA_16
nSTAND3
RsgA_GTPase
ABC_ATPase
AAA_24
APS_kinase
G-alpha
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABI43477
UniProt:
Q0HTS8
LinkDB
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Position
complement(2948075..2949880)
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AA seq
601 aa
AA seq
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MTASPKDEMWTVFKRLLGYLKPMKGMFLLSVCGLIVYGLVDAAFISFIGPFIDKGFSSST
PAISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISYMSARLIMDMRQ
QVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFY
NSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGG
QETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADLTAG
TFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPESDTGTYTVKRAKGNL
RFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDIK
LDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEATREQIIQAATLAHAME
FIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQ
GLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFG
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatctcctaaagacgaaatgtggacagttttcaaacgattactgggctatctc
aaaccgatgaagggcatgtttttgctttcagtttgcggcctgattgtatatgggcttgtt
gacgcagcctttatttcctttattggtccttttatcgataaaggcttttccagcagtaca
ccagcgatcagtaacggtattgcactccccactagccaaggctttcatgccgacaatcag
gtgctattaatggcgccgatagtggttattttaatgttctccttgcgtggctttgcaaac
ttcgtatccacctatggtatctcctacatgagtgcccgtttgatcatggatatgcgccaa
caagtgtttgaacattatctgagcttgcccgtgagctacatggataaggaaaacacaggt
aatctgatttcaaaagtcacctttgacaccgaacaaattgcccgagcatcaggcagcgcc
ttgatttcaatcgtgcgtgacggtgtgactgttattggcatgttggggttgatgttttat
aactcttggaaactttccctctgtatcttagtgattggtccgattatggggctagtgatc
actattgtgagtcgtcgtttccgtaaggtgtcaaaacaaattcaaacggcgatgggcgat
gtcagtgccgcaaccgagcagatgatcaaaggccataaaaacgtgttggccttcggtgga
caagaaaccgaaacggctcgctttgccaaaattaatgacagaaaccgtcatcaaaatatg
aagcttgcggtcgcgcaagcggttagccagccgcttattatggtgattggctcctttgcc
ttagcctttgtactctatgcggcgagcctcgatagcatgaaagccgatctgaccgcgggt
accttcgcgactattctcggtgccatgatggcaatgctacaacccatcaaaaacctcacc
cgggtaaatgccgaatttcagcgcggtattgcggcctgtaccacggtttttgaattgtta
gacactctgccagagtccgatacaggaacctataccgtcaagcgcgctaagggtaactta
cgtttcgataatgtctctttcagttacgaagggcaggagcgtcgcgccttagataaaatc
gattttgaagtcactcaaggtcaaaccttagccttggttgggcgttctggctcgggtaaa
tctacgatcgccagtctagttacgcgtttttacacaggcttagaatctggtgatatcaag
cttgatgatgtgagtatttatgattactcattgaaatcattacgtagtcaagtggcttta
gtttcgcagcaggtaacactgtttaacgataccattgccaacaacatcgcctatgcttat
cccggtgaagcgacccgagagcagattattcaggcggcaaccttggcccatgcgatggaa
tttatcgagcaattgcccgaggggttagatacacaagtgggtgaaaacggggtgttatta
tcgggcggccagagacaacgtatcgcgattgcccgcgctatgctgcgtgatgcgccagtg
ctgatcctcgatgaggccacttcggcactcgataccgaatctgaaaaggccattcagcag
ggtctagacaatttacgccagaatcgtacttctgttgtgattgcccaccgcttatctacc
attgaaagtgccgatcaaattttagtggtagatcaaggccgtatcgttgagcggggtacc
cataaatccctgctggaacttggcggtatgtatgccaagttataccaaatgcagtttggt
agctaa
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