Shewanella sp. MR-7: Shewmr7_2519
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Entry
Shewmr7_2519 CDS
T00389
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_2519
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shewmr7_2519
Archaeal homologous recombinant proteins
Shewmr7_2519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
GTP_EFTU
cobW
Motif
Other DBs
NCBI-ProteinID:
ABI43504
UniProt:
Q0HTQ1
LinkDB
All DBs
Position
complement(2975763..2978819)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPLSLSMSAFGPFASSQTIDFTELGNNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSVLTEVTFHFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLYKI
APDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYKRIEDTLKAKAADIRNLVKEQRARRDGILQTAALTSDDELTAELSRIEPEFAA
ATAAKEQSVAAHLAALKQRDSAQQLFAEFTRLQELQAEALSLNEQQAQIATQTTRLEVAK
QALRVKPLLDNALSREQEASVAAAQRDSAQLTLDAAKLALSHAETAAQEIIPLEHKLREV
EQQNSHLSALVPQLAEFASLEQALAQAKEILQHTKLQGQESKTALATLVEQRGHCENQLP
ALQSQSEQQLATAQALQQHRHMLEQFKQWQQICAKVAHTQGVLEQVGLQGKALNTQYQAA
STAYKSLQLKWFQGQAAILARELKPHEPCPVCGSSAHPHPAVSHEDLPTDLQLQAAQDAE
ALALDNLNKARAEYRGLQKQLETQQHQANELATVLGDKVELSLESHSQTLERLMQQAKQA
DAAAQALQQLQQQIKTLQQQESTLAQQLELERERYREQEGKVERLSGQFAEKALRIPEEY
RTLDVLNQAIAHNQQQLEQIKRQIDVLRTAQQQATEQSVAAQTALSAAIERCHATADLQA
QAQQTLLTALDNAGFIDRDALREALLTDEQMQTLAEGIETYHRQCALNQSQLSQLTTKLS
ESTLPDLDALEALLTERLAQLKTAEEVWSQLNTRLTLLNNTQTQLAIVDQKAKSLEDEYA
VVGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKVILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactctcgctgtctatgtcggcctttggtccttttgcttcgagtcaaaccatt
gattttaccgaactggggaataaccccttattcctgatcaacgggccaacaggcgcgggc
aaaaccacgctgctcgacggaatttgttttgcgctctatggaaaaaccacgggtaacgag
cgtgaaggcagccagatgcgctgcgatatggccgatgatagcgtactgactgaggtgacc
tttcatttccaattaggcagtacgggttatcgtattcgtcgcgtccccgagcaggaaaga
ttaaagaaaagcggtgatggctcaacggtacaaaagagtgaggcgcagctgtataagatt
gccccggatggcagtgaaacccttatcgtcgccagtaaagtgtcagacgccacggccgaa
attgaggcattaaccggcctagatgtggagcagttccgccaagtgatggtgcttccgcag
gggaagtttcgcgaattgctgatggccgactctaaggcgcgtgagcagatttttagccaa
ttattccaaacccatatctataagcgcatcgaagatactctaaaggctaaggcggcggat
attcgcaatcttgtcaaagagcagcgcgcccgccgtgacggtattttgcaaacggcagca
ctcacatccgatgatgaacttactgcagagttgagtcgcattgaacccgaattcgcggcg
gcgacggcagcaaaagagcagagcgttgcggcgcatttggcggcattaaaacagcgtgat
agcgcgcagcaactctttgctgaatttactcgcttacaggaattgcaggctgaggcgctt
agccttaatgagcagcaagcgcaaattgcaacccaaacgacacggcttgaggtggccaag
caagcactgcgggtaaaacccttattagataatgccttgtcgcgggagcaagaagcgagt
gttgcagccgctcagcgcgatagcgcacagttgacgctcgatgccgctaagctcgcactc
tctcatgctgaaactgcggcgcaggaaattatcccccttgaacataagctgcgtgaggtt
gagcagcaaaatagtcatctcagtgcgttagtgccgcagctggcagagtttgccagcctg
gaacaagctttagcgcaggcaaaagagatactgcaacacaccaaattgcaggggcaggag
agtaaaactgcacttgccaccttagttgaacagcgcggtcattgtgagaatcaactgcca
gccttgcaatcgcaaagtgagcagcaacttgccactgcgcaggcgctgcagcagcaccgt
catatgctcgagcagttcaagcagtggcagcagatctgtgccaaagttgcgcatactcaa
ggggttcttgagcaggtcggcttacaaggaaaagcgcttaatacccaatatcaagcagct
tcaacggcttacaagtctttgcaactgaaatggtttcaaggtcaggcagccattttagct
agagagttaaaaccccatgagccatgcccggtttgtggcagttcggcccatccgcatcct
gcggtgagtcatgaggatttaccaacggatctacaattgcaggcggcgcaggatgccgag
gccttggcgctcgataatctcaataaagcgcgggcagaatatcgcgggctgcaaaagcaa
ttagaaacacagcaacatcaggcgaatgagctggcaacagtccttggcgataaggttgag
ttgtcactcgaatcccatagccaaaccttagaaaggctcatgcagcaagcgaagcaagcc
gatgctgcggcgcaagcgctgcagcagttacagcaacagatcaaaaccttgcagcagcaa
gagtcgactttggcgcagcaacttgaacttgagcgtgagcgttaccgtgagcaagaaggc
aaagtcgaacggctatcgggtcaatttgcggaaaaagcgctgaggatcccagaagaatac
cgaacactggatgtattgaatcaagcgattgcacataaccagcagcaactcgaacagata
aaacgtcagattgatgttctcagaaccgcgcagcagcaggcaacggagcagagtgtggcg
gcgcaaacggcattatcggcggcgatagagcgttgtcatgctacggcagatctgcaggcg
caagcacagcagacactactgacggcactggataacgcaggctttattgatagggatgca
ttgcgcgaagccttgttaaccgatgagcaaatgcagacgctggccgagggcatagaaacc
tatcacagacagtgcgccttaaatcagtcgcaactgagtcagcttacaaccaagttgagc
gagtcgacattacccgatcttgacgccttagaggccttgctcactgagcgactcgcacag
cttaaaacggcggaagaggtatggagtcaactcaatactcggctcaccctgcttaacaat
acccaaactcagcttgcgattgtcgatcaaaaggccaaatccctcgaggatgaatacgct
gtggttggcaccttggccgatgttgccaatggtaatacgggcaacaaaatttccctgcaa
cgctttgtgctcagcgtattgctcgacgatgtgttgcttgcggcaacgcagaggctgcat
ttaatgagtaaagggcgctaccgattattgcgtaaagaggacagggcgaagggcaataag
gcctcagggctagagcttgaagtcgaggatgcctacacctctaaagtgcgcccggtagcg
accttaagtggtggtgagagttttatggctgccttgtcgatggccttgggcttatcggat
gtggttcaagcttacgcgggcggcataaaactcgataccttatttattgacgaaggtttt
ggcagcctagatcaggactccctcgaacttgccatccgtaccctcatggatttgcaatcg
gcggggaggatgattggggtgatttcccatgtttcggaaatgaaagagcagataggtacc
cgaatcgacatcttgaaaacctcccatgggagcgaaatcaaggtgattttgccttag
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