Shewanella sp. MR-7: Shewmr7_2520
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Entry
Shewmr7_2520 CDS
T00389
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_2520
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shewmr7_2520
Archaeal homologous recombinant proteins
Shewmr7_2520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ABI43505
UniProt:
Q0HTQ0
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All DBs
Position
complement(2978816..2980018)
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AA seq
400 aa
AA seq
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MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDRSIPPASAV
ALLDEVLNRLITELGLQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQADLTPIRLTS
SSGDAYFYPLPYAEPATVRQVFEADAKGLGVSSHEEAMALLLEQVRSHDSQGLPKVVVSH
CFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQYKGSEHVRYSGSILKYS
FSEQHQHKSVTLVDVTAHTPAQIQLLPLTALRDVRIIEGELAHLLDLGKTDAKREDYLMV
RLLDKHAILDAMGKLRSVYPNVLHLERTGLMAGEQAVALNRDHIKKGEMAMFRDFFSQVS
GEELSDAQQAVMDEILTKLHRDEGDSGESTRVAAKGEQSA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatccatacctcggactggcacattggtcgccagttacataatcaatcactc
ttagaagaccaagcctatgtgcttgatcaaatcgtgacattggctgagcagcacactgtc
gatgcggtgattattgccggggatatttacgataggtcgattcctcctgccagcgccgtg
gctttgctcgatgaggtgcttaatcgcctcatcacagagttaggattacaagtgctgatg
atcgccggtaaccacgacgggcacgaacgcttaggctttgcggctaaacaaatggcggca
agtggcttgcacattattgggccgcttcaggctgatttaacgccgatccgcttaaccagc
tcaagtggcgatgcttacttttatccgctgccttatgcagaacctgcaaccgtgcgccaa
gtatttgaggcggatgctaaggggcttggcgtgtccagccatgaagaggcgatggcgcta
ctgctagaacaagtccgcagccacgacagccaagggttacctaaggttgttgttagtcat
tgctttttagatggtggcagtgagtccgagtccgagcggccattgagtattggtggcgcc
gataaaatttccccacggctttttagtgagtttgactatgtcgccctcggccacttacac
ggaccgcaatataaaggcagtgaacatgtacgttattctggctcgattttgaaatactcc
tttagcgaacagcatcaacataagtctgtcactttagtggatgtcacagcgcacactccg
gcgcagatccaactcttgcccttaactgcgctgcgcgatgtgcggattatcgaaggagaa
ttggcgcatttattagatcttgggaagaccgatgccaagcgtgaggattatctgatggtc
agactccttgataaacacgccattttagatgccatgggcaaattgcgcagtgtctatccc
aatgtgctgcatctagaacgtactggattaatggcgggcgaacaggccgtcgcactcaat
cgtgaccatatcaaaaaaggcgaaatggcgatgttccgtgattttttcagtcaggtttct
ggcgaggaattgagtgatgcgcagcaagcggttatggatgagattttaactaagcttcac
agggatgaaggcgatagcggtgaatctactcgcgttgcagcaaaaggggagcaatccgca
tga
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