Shewanella sp. MR-7: Shewmr7_2552
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Entry
Shewmr7_2552 CDS
T00389
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
shm
Shewanella sp. MR-7
Pathway
shm01503
Cationic antimicrobial peptide (CAMP) resistance
shm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewmr7_2552
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Shewmr7_2552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shm02000
]
Shewmr7_2552
Transporters [BR:
shm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
Shewmr7_2552
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABI43537
UniProt:
Q0HTL8
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All DBs
Position
3012431..3014056
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AA seq
541 aa
AA seq
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MSVLIRRLCLSTAVFCMSGLLVACGPQRLPSGLVYCSEGNPESFNPQLVTSGTTIDATSH
QIYSRLVDYDAISGQLVPALATSWAESDDGLSYRFTLRENVKFQHSSRFTPSRDFNADDV
LFSFNRIIDKHHPYHGVSRTGYPFFQSIGFSEQVKSVEKINDHEVIFRLARKDASFLSNL
ATDFAVILSSEYADQLLAQGHPENLDHFAIGTGPFTLVHYAKNEYVRYRRNPDFWGEPAK
VEMLIYDITPKSTVRLAKLIAGDCSVSALPKAGELPVIKQHEQLSIESQPGLNVAFWAFN
TQKPPLDDVRVRRALAYAVDKQNILRAVYQNTAIEATGVLPPASWAYDSNKKLLDYNPQK
ARDLLKEAGIKHLSIDIWAMPVARAYNPNALKTAELIQSDLANIGVKVNIISYDWSVFSQ
RLSRDEYDSVLIGWNADNSDPDNFFTPLLSCSAMQSNNNRSRWCNKEFDAILDRAREVST
QAERKAIYQEAEAFLAEQVPMLSLAHAKRVALTRSNIHDMQLTPFGGISFSHTSQAEQET
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgctaataagacgcctgtgcctatcaactgcagttttctgcatgagtgggttg
ttggttgcatgtggcccccaacgactcccttccggtttggtctattgttccgaagggaat
cccgagtcttttaatccgcagttggtgacctctggcaccaccatcgacgccacctcacac
caaatttatagccgcttagtggactatgatgcgatttcaggccagctcgtgcctgcgctg
gccaccagttgggccgagagtgacgatggtttaagttaccgttttaccctcagggaaaat
gttaagtttcaacattcatcccgttttacaccaagccgcgactttaacgccgacgatgtg
ctgttttccttcaatcggattatcgataagcaccacccttaccatggcgtatcacgtacc
ggttatccttttttccaaagtattggattttcagaacaagttaaaagtgttgagaaaatc
aatgaccatgaggtcatctttcgtttagcacgcaaagatgcgtcgtttttatcaaatcta
gcgacagactttgccgtcatcctctctagcgaatatgccgatcagctacttgcgcaggga
caccctgaaaatcttgatcatttcgccataggtacagggccttttaccttagtgcattac
gccaaaaacgaatatgttcgctatcgccgcaatcccgacttttggggagagcccgccaag
gtcgagatgctgatctacgatatcacccctaaaagcactgtgagactggccaaactaatc
gctggtgactgcagcgtatcggccctgcccaaagcgggagaactgcccgttatcaagcaa
catgaacagctcagtattgagtcacaacctggtctcaacgtcgccttttgggccttcaac
acacaaaagcctcctttagatgatgtacgcgttcgccgcgccctcgcctatgccgtagat
aagcaaaatatcttacgtgccgtgtatcaaaacaccgccatagaagccacaggtgtgttg
ccgccagcgtcttgggcctacgacagcaataaaaaactattagattacaatccgcaaaaa
gcgcgcgatctgttaaaagaagcgggaataaaacatctcagcattgatatctgggccatg
cctgtcgcccgcgcctacaaccctaatgcactgaaaactgccgaattaattcaatcagac
ttagccaatattggcgtaaaagtgaatatcatcagctacgactggagcgtttttagccaa
agattgagccgtgatgaatatgactctgtgctcattggctggaacgccgataacagcgac
ccggataacttcttcactccattactcagctgctcggcgatgcaatcaaacaacaaccgt
tctcgctggtgcaataaagagtttgatgccattctagacagagcaagggaagtctcgact
caagccgaacgtaaagcgatttaccaagaggccgaagccttcttagccgaacaagtgcca
atgttaagtttggcccatgctaaacgtgtcgccctaacccgcagcaacatccacgatatg
caactgacaccttttggcggcatctccttttcccataccagtcaagctgagcaggagaca
cactga
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