Shewanella sp. MR-7: Shewmr7_2560
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Entry
Shewmr7_2560 CDS
T00389
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shm03032
]
Shewmr7_2560
03036 Chromosome and associated proteins [BR:
shm03036
]
Shewmr7_2560
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_2560
DNA replication proteins [BR:
shm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Shewmr7_2560
Chromosome and associated proteins [BR:
shm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Shewmr7_2560
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Shewmr7_2560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ABI43545
UniProt:
Q0HTL0
LinkDB
All DBs
Position
complement(3021618..3021890)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKEGDKISLVGFGTFEVRERAERTG
RNPQTGEEIKIAAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcttctggtgctgacatttctaaagccgct
gctggccgtgcactggattcttttatcgcagctgtgaccgaaggtctgaaagaaggcgat
aaaatttctcttgttggttttggtacttttgaagtgcgtgaacgtgctgagcgtactggt
cgcaacccacaaacgggtgaagaaatcaaaatcgcagcagcaaaaattccagcattcaaa
gctggtaaagctctgaaagacgctgtcaattaa
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