Shewanella sp. MR-7: Shewmr7_2742
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Entry
Shewmr7_2742 CDS
T00389
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
shm
Shewanella sp. MR-7
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Ortholog
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_30
MCM
HTH_28
Phage_CP76
AAA_16
HTH_50
HTH_23
HTH_Tnp_ISL3
HTH_7
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABI43727
UniProt:
Q0HT28
LinkDB
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Position
complement(3249823..3251232)
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AA seq
469 aa
AA seq
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MIRPTLFYHLQDFETEQALVQLEGAQTYNKLRSTDDLSWISQLEANRIDVAIIELPRLSR
EDYLALLESSAIADVEFIFLSDGLPNPHLDKLLSKYAGYHFRKPIDMSLLCETLADFAQH
LVANTSTRIRPFASELDQYGLLVGSSLPMHRLYRTIRRVSAAESNVLIIGESGAGKELVA
NTIHLASPRVNKPYIAINCGALSPELVDSELFGHVKGSFTGANRDHQGVFEQAEGGTLFL
DEVTEMPLEHQVKLLRVLENNEYRPVGSPKVLKANVRIVAATNRDPLVAIEQGQLREDLY
FRLAHFPIQVPPLRERGEDIVGLAKHFLAYRNAAEKQSKVFSPSSLEAIAAHTWPGNVRE
LKHAIERAYILADHEITPEHLQLTPSLDKEATAEENVVIPQGMRLEELEKIAIYQALETS
QGNKTDTAEQLGISVKTLYNKLSKYEQESDAQTVVDAVSEDSVSNSVAK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaccaacgcttttctatcatctacaggacttcgagaccgagcaggcattagtg
cagctcgagggcgcgcagacctacaacaagctacgcagtaccgatgatttatcttggatt
agtcagctggaggccaatcgtatcgatgtggcgatcattgagctgccccgtctaagccgt
gaagactatttagccttactcgaatccagcgccattgcggatgtggagtttatttttctc
tccgacggcctaccgaatcctcacctcgataaactcttatccaaatacgcgggctaccat
ttccgtaagcccatcgatatgtcgttgctgtgcgaaaccttagcggattttgcccagcat
ctggttgccaatacttcgacgcgcattcgcccctttgccagcgaattagaccaatatggt
ctgctggtgggttcctcattacctatgcaccgtttgtatcgcactatccgccgggtgtcg
gccgccgagagcaatgtgttgattatcggtgagagtggtgcgggtaaagaactggtcgcc
aataccattcacttagctagcccgcgggtgaataagccctatattgcgattaactgcggc
gccttgagcccagaattggtcgatagtgaactcttcggccatgtaaaaggctctttcact
ggcgcgaatcgcgatcatcaaggggtatttgagcaggccgaaggcggcaccttattcctc
gatgaagtcaccgaaatgcccctagagcatcaagttaagctgttaagagtgctggaaaat
aatgaatatcgccccgtcggtagccctaaggtgctcaaggccaatgtgcgtattgtggcg
gcgacaaaccgtgatcctttagtggcgattgagcaaggacaactgcgggaagatttgtac
tttcgcttagcgcatttccccattcaagtgccgccattgcgggagcgtggggaagatata
gtcggacttgcgaagcattttctggcctatcgcaatgcggcggaaaaacagagtaaagtg
ttctcgccctcaagtttagaggcgattgcggcccacacttggccggggaatgtgcgcgag
ttaaagcatgctatcgagcgcgcttatattttggcggaccatgagataacccctgagcat
ttacagcttacgcccagtttggataaagaggcgactgcagaggaaaatgtggtgatcccc
caaggtatgcgccttgaggagctggaaaaaatcgccatttaccaagcgcttgaaacgagt
cagggcaacaaaaccgacaccgccgagcaacttgggatcagtgtaaaaaccctctataac
aagctcagtaaatatgagcaggagtcagatgctcaaactgttgttgatgccgttagcgaa
gattccgttagcaatagcgtcgccaagtag
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