Shewanella sp. MR-7: Shewmr7_2831
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Entry
Shewmr7_2831 CDS
T00389
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
shm
Shewanella sp. MR-7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
5TM-5TMR_LYT
PAS
PAS_9
PAS_8
PAS_4
PAS_11
PAS_7
Cas10-Cmr2_palm2
Motif
Other DBs
NCBI-ProteinID:
ABI43815
UniProt:
Q0HSU0
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All DBs
Position
complement(3353303..3356332)
Genome browser
AA seq
1009 aa
AA seq
DB search
MDKSIFLPLVQNAALLLALVFLYDAIPKKHQRQYFLLWRLGIGLLIGGIGVTIMSTPWMY
EPGIIFDTRSVLLCVTGLFFGGLPTVVAVIITGAYRYSIGGAAMWVGLAVIISSGLIGVI
WRQYRKSYLANISGREIFSFAFVVHIVMLLWFFLLPSHVAIPVLQKIMLPVLTIYPLATW
LLSRLLSRRFELERDEQIRLQDDFLFRSQFNVGNIGIAITGVDQKWIKVNPRLCQMLKYS
EDELLHMTWKQLTHPDDIEADIVKFELMLAGKIDNYEMDKRFIAKDSAIVYTHMTVACKR
ANHQVLLVIAGYLDVTAQTLADREVLASREQLELVLSSSDLGVWDWDIRNDHIERNARSA
DILGCDIDMLNANSRQWMDSIVPEDRPKVLHSIEAHIRGETPQHKMEYRLKTLNRNIRWI
LDTGKVVSRDTNNNALRMCGTYTDITEAKLIEESLKLSALVYDNSSEAMSVLDETGVIIT
VNAAFTEITGYSESEIRGQHIRMLYCDLNGHGFYTEMNNEIREKGEWQGEMRQRRKNNEE
YVIWLTINTINDKDGQPYRRVALFSDITDKKQSEHLIWKQANYDTLTGLPNRRMLLEYLG
AEIRSADRNRNHFALMFLDLDYFKEVNDTLGHAMGDLLLIETANRLKSCVRDADVVARLG
GDEFTVVLSAMADHKGIERVAEHILRRISEPYVLGEETAYISASIGITLYPDDATSIEGL
LKHADQAMYAAKDQGRNRFNYFTPSMQEYAKYRMRLIQDLRQAVVNKEFELHYQPIVTMG
TGEVLKAEALLRWFHPERGQVSPAEFIPVAEDTGLIVEIGNWVFEQAARQSAQWRKTLGV
EIQISVNKSPIQFRDEGTLLHNWLELLQELDVTGTGVCVEITEGLLLDASMGVTEKLLAY
RDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRHIDTDESDQTLCEAIIVMAHKL
GMKVIAEGVETEAQRQVLLNAGCDYGQGYLFSKPVSAAEFASQYLLKEA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagcatttttttacccttagtacaaaatgcggcgttattgctcgctctcgtg
tttttatacgatgcgattcctaaaaagcatcagcggcagtattttctgctgtggcggctg
ggaataggattactcataggtggcataggcgtcacgattatgagtaccccatggatgtac
gagcccggcattatcttcgacacacgctcagtactcttatgtgttaccggcctctttttt
ggtggtttgcccactgtggtggcggtgattatcacaggggcttatcgatacagcattggt
ggcgccgccatgtgggttggtctggctgtgatcatctcctcaggcttgattggggtgata
tggcgccaataccgtaagtcctatcttgccaatatttcgggcagagaaatcttcagtttt
gcctttgtggtgcacatagtgatgttgctgtggttttttctgctgccgagccatgttgcc
atccccgtgctgcaaaaaattatgttgcccgtgttaaccatttacccccttgctacttgg
ctactgagccgtttgctctcccgccgttttgaacttgagcgtgacgagcagatccgttta
caggatgattttttgttccgcagccaatttaatgttggcaacattgggattgccattact
ggcgtcgaccaaaagtggatcaaggtaaatccaaggctgtgccaaatgctgaagtactca
gaggatgagttgctgcatatgacctggaaacagctcacccatcccgatgatatagaggcc
gacatcgtcaaatttgagcttatgcttgcgggtaaaattgataactatgagatggataaa
cgctttatcgccaaggatagcgccattgtttatacccatatgacggtggcctgtaagcgc
gcgaaccatcaggtgttattggtgattgcgggctacttggatgtcacggcgcaaacccta
gccgatagggaagtgctcgccagccgtgagcaacttgagctggtattaagcagtagcgac
ttgggcgtttgggactgggatatccgcaatgatcatatcgagcgtaacgcccgaagcgcc
gatattttaggttgtgacatcgatatgcttaacgccaatagtcgccaatggatggactcg
attgtgcccgaggacaggcccaaggtgctgcactctatcgaagctcatattcgcggggaa
acgccgcaacataagatggaatatcgcttaaaaaccctcaatcgtaatattcgttggatt
ttagataccggcaaagtcgtgagtcgcgataccaataacaatgccttgagaatgtgcggt
acctataccgatattaccgaagctaagctgattgaagaatccttaaagctctcagcattg
gtctatgacaacagttctgaagccatgagtgtgctcgatgaaacgggcgttattatcaca
gtcaacgccgcctttaccgagatcactggttatagtgaatcggaaattcgcggccagcat
attcgcatgctttattgcgatctcaacggccatggtttttataccgagatgaataatgaa
atccgcgaaaaaggcgagtggcagggggaaatgcgccaacgacgtaagaacaatgaagag
tacgttatttggctgaccatcaacaccattaacgataaagatggccaaccctatcgccgc
gtggcgctgttttccgatatcacagataaaaagcagagtgagcatctgatttggaagcag
gctaactatgacacgctcactggtttaccgaatcggcggatgctgctcgaatatttgggg
gcggaaatcaggagcgccgaccgcaatcgtaatcattttgccttgatgttcctcgatttg
gattactttaaagaggtgaatgacaccctaggccacgccatgggggacctgttgctgata
gaaaccgccaatcgcttaaagtcctgtgtgcgggatgccgatgtggtggcgcggctcggc
ggcgatgaatttaccgtagtgctcagcgctatggcggatcataagggtattgagcgggta
gctgagcacattttaaggcgcatttccgagccctatgtgctgggtgaggagaccgcctat
atcagcgccagtatcgggataactctgtatcccgatgatgcaaccagcattgaaggtttg
ctcaaacatgcggatcaggccatgtatgcggctaaagatcaggggcgtaatcgtttcaac
tacttcacgccttcgatgcaggaatatgcaaagtatcggatgcgcttaatccaagattta
cgccaagccgttgttaacaaagagtttgagttgcattatcaacctatagtgactatgggg
actggtgaggtccttaaggccgaagcgcttttacgttggttccaccccgaacgtgggcag
gtttctccagctgagtttatacccgttgccgaagatactgggctgattgtcgagattggc
aattgggttttcgagcaggcggcgcgccagagcgcacaatggcgtaaaacccttggggtc
gagatccagatcagcgttaacaagtcgcctattcagtttcgcgatgagggcacgctgctg
cacaattggctggagttactgcaggaattggatgtgacaggcacaggcgtgtgcgtcgaa
attaccgaaggactcttactcgatgccagtatgggcgtgaccgaaaagcttcttgcctat
cgggatgcgggcgtacaagtttctctagacgactttggcactggctattcatcactggcg
tatttgaaaaaattcgatatcgactatttgaaaatcgatcaatcttttacccgtcatatc
gacacggatgaaagcgaccaaaccctgtgtgaggcgattatcgttatggcccataagtta
ggaatgaaagtgattgccgaaggggttgaaaccgaggcgcagcgccaagtgttgcttaat
gcgggctgtgactatggccaaggctatttattctctaaaccggtgagtgcggctgagttt
gcaagccagtatttgctcaaagaggcgtag
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