Shewanella sp. MR-7: Shewmr7_2940
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Entry
Shewmr7_2940 CDS
T00389
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shm03000
]
Shewmr7_2940
Transcription factors [BR:
shm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shewmr7_2940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABI43924
UniProt:
Q0HSI1
LinkDB
All DBs
Position
complement(3481241..3482149)
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AA seq
302 aa
AA seq
DB search
MLHLNYNHLYYFWMIKKKGSVAKAAEALCLAPQTITGQIRALEDRLNGSLFKRVGRNLEA
TELGELVFRYADKMFSLSYEMLDLLNYQKDDAILFEVGIADALSKALASRVLLSVVPNDG
SMHLACYEATHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGVSFFSAETYSA
DFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRGIFVT
PSIYPQEVISHGMHLLGETLDVKEEYHVMFAERMIQHPAVKRLLETDFSDLFAGLDSQVQ
QC
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcttaattacaaccatctttattatttctggatgatcaagaagaagggctca
gtggctaaggccgcagaagctctttgtttagcgccacaaaccatcacaggccaaattcgc
gccttagaagacaggttaaatggtagtttattcaaacgtgtcggacgaaatttagaagcg
actgaacttggggaactggtgtttcgctacgccgataagatgttttccctcagttatgag
atgctcgacttactgaactatcaaaaagatgatgccattttatttgaagtgggtattgcc
gatgccttgtctaaagccctggcgagtcgagtattactttctgtggtacctaatgacggt
tccatgcaccttgcctgttatgaagcgacccacgaaagtttaatgacccgtttacgcgag
cataaattggatatgatcctctcagactgtgcgggtgagtcattgaaatatcccgagatt
ttatcgaaaaagctgggtgagtgtggcgtgagttttttttctgcagaaacctacagcgcc
gatttccctgcttgtttagagcaagggcaattgctgatcccaggtcgtagaacatcgctt
gggcaacaattataccgttggttcgatgagcaaaatcttaaggtcagtatcttaggcgaa
tttgatgatgcggccatgatgaaggcctttggctaccttaaacgtggaatcttcgttacg
ccgtcgatttatccccaagaagtgatttcccacggcatgcatttactcggtgaaactctt
gatgttaaagaagaataccatgtcatgttcgcagagcggatgatccaacatccggcggtg
aagcgtctattagagacggatttcagtgatttatttgccggattagacagccaagtccag
cagtgctaa
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