KEGG   Shewanella sp. MR-7: Shewmr7_2978
Entry
Shewmr7_2978      CDS       T00389                                 
Name
(GenBank) Peptidoglycan-binding domain 1 protein
  KO
K02450  general secretion pathway protein A
Organism
shm  Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:shm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shm02044]
    Shewmr7_2978
Secretion system [BR:shm02044]
 Type II secretion system
  General secretion pathway protein
   Shewmr7_2978
SSDB
Motif
Pfam: AAA_22 AAA_16 PG_binding_1 SLFN-g3_helicase AAA_30 AAA_19 GspA_C39-like AAA_14 AAA_5 AAA nSTAND3 ABC_tran Mg_chelatase Sigma54_activ_2 TsaE ATPase_2 AAA_7 NACHT TrwB_AAD_bind AAA_33 AAA_25 CPT TniB cobW Sigma54_activat AAA_18 PIF1
Other DBs
NCBI-ProteinID: ABI43962
UniProt: Q0HSE3
LinkDB
Position
complement(3528614..3530302)
AA seq 562 aa
MYKAFYGLSDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
RCLLGQLPDHTDTAFILNPSLTELELLATLCDELKISYGENPTLKQLTDHLSRFLLANHE
KGRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVILIGQPELQLLLKRQELRQLA
QRITARYHLLPLNEDEIALYVLHRLQVAGRFEPLFTRKAIKVLHKYSGGIPRLINLLCER
ALMAGYAQSKVPIDHHMVRQAAAEVLGEEEPQQNKLLWPSAIAAALVVAFGVSYWLFTES
PAVANVANSPVTQVSQTTPAVTQAATPNNSIQPEQTLAATQSSPVASEPQTLAAPDPSVR
VLQEAIKQSRSIDTAFAGLFNVWGKVPFKGLTACQSALEQGLSCYQQQGNWMSLTRLNYP
AVVYLVDDNQQDFYGAVIAVDGEQLLMQLGEQQLWVDRAWFNQHFSGTFEILWQAPNLPM
LEISHKSSPGQLQWLENALAHVANRPSRRVSQFDLKLENDLKAFQSQHGLKADGIAGNQT
LVRLNLYLSDQGPRLTDNGAQS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtacaaggccttttatggactcagtgataaccctttttcgattgcacccaatcctcat
tatttattcttgagtgacagacacagagaagccttagctcatctgacctatggactaggt
gagactgggggatttgtgttattgacgggggaggttggtacgggtaaaacgacagtatct
cgttgtttacttgggcaattgcccgaccataccgacacggcatttattttaaatccttcg
ctgactgagttggaactcctcgccacactctgtgatgaattgaagattagctatggtgaa
aacccaacccttaaacagttaaccgatcatctaagccgttttttgctggccaatcatgag
aaaggccgcaataccgtactcattatcgatgaggcgcagcatctgcgtgccgaagtatta
gagcaattaaggctgctgacgaaccttgagaccgacaccaaaaaactgctgcaggtgatc
ttaattggccagcctgagttgcaattgctacttaaacgtcaagagctgcgacaattagcc
cagcggatcaccgcgcgttatcatctactgccactcaatgaagatgaaatagcgctctat
gtgttgcaccgtttacaggttgcaggtcgtttcgaaccgctatttacccgcaaagcaatt
aaagtgctgcacaaatacagtggcggcattccgcggttaattaacttgttgtgtgagcgt
gcgctgatggcgggttacgcacaatctaaggtaccaatcgatcaccatatggtgagacaa
gcggcggccgaagtattaggcgaagaagaaccacagcaaaataaactcttgtggccgagc
gctattgcggcggcattagttgtggctttcggcgtgtcttattggctatttaccgaaagc
cctgcggttgccaatgtggccaactcgcctgtgacacaagtgagccaaacgacacctgca
gtgactcaagcagcgactccaaataacagtattcagccggagcaaacactggctgcgacc
cagagttcgccagtggctagtgagccgcaaacgcttgcggcgccggatccgagtgtgcgg
gtgttgcaggaggccatcaaacaaagtcgcagtattgatactgcctttgcaggcctcttt
aatgtatggggcaaggtcccctttaaaggcttaactgcatgtcagtcggcgctggagcag
gggctttcctgctatcagcagcagggcaattggatgtcgctcacaaggctcaattatccc
gcggttgtgtatttagtggatgataaccaacaagatttttatggtgctgtgattgctgtc
gatggtgagcagctattaatgcagttgggcgagcagcagctttgggtcgatagagcctgg
ttcaatcaacactttagcggcacctttgaaattctctggcaggcacctaatttgcctatg
ctggaaatcagccataagtcgagtccaggacaattacaatggcttgaaaatgcccttgct
catgtggctaaccgaccttcgcgccgggtgtctcaattcgatctgaaattagagaacgat
cttaaagccttccaaagccagcatggtttaaaggccgatggtattgcaggtaatcaaacc
ttagtgagactgaatttgtatttaagcgatcagggaccgcgcctcaccgataatggagcg
cagagttaa

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