Shewanella sp. MR-7: Shewmr7_3129
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Entry
Shewmr7_3129 CDS
T00389
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shewmr7_3129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_3129
Enzymes [BR:
shm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Shewmr7_3129
DNA repair and recombination proteins [BR:
shm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Shewmr7_3129
Prokaryotic type
Shewmr7_3129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABI44113
UniProt:
Q0HRZ2
LinkDB
All DBs
Position
complement(3707501..3708160)
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AA seq
219 aa
AA seq
DB search
MATWQAFIDHQRSQPYYQQLIAFVNQERELGKVIYPPKEDVYNAFKTTPLEQVRVVLIGQ
DPYHGPDQAHGLCFSVKRGIKPPPSLANMYKELVNDIPGFQIPNHGDLTQWAEQGILMLN
TVLTVEQGQAHSHANAGWETFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHHIL
SGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQWQV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttggcgacttggcaggcatttattgaccatcaacgttctcaaccctattaccagcagttg
atagcatttgtgaatcaagagcgtgaattgggtaaggtgatctatcctcctaaagaggat
gtgtataacgcctttaaaacaaccccattggagcaagtgcgtgtagtgcttataggtcaa
gatccctaccatggccccgaccaagcccacggcctgtgtttctcggttaagcgaggcatt
aaaccgccgccatcgctggccaatatgtacaaagagttagtgaacgatattcccggtttc
caaatccctaaccatggtgatttaacccagtgggcggagcaggggatcttgatgctcaat
accgtgctgacggtggagcaagggcaagcccactcccatgctaatgcaggctgggaaacc
tttaccactgaggcgttaaagctgcttaatgcgcaggagcggccgattattttcgtactc
tggggcagccatgccatcaaaaaaggggcggtgattactgcgccgcagcatcacattctg
tcgggcccccacccgtcaccgctgtcggcctatcgcggcttcttcggttgtgggcatttt
tctaaagtgaatcaactgctaatggcgcggggtgaggcaccgatccaatggcaggtttaa
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