Shewanella sp. MR-7: Shewmr7_3198
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Entry
Shewmr7_3198 CDS
T00389
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00630
Glyoxylate and dicarboxylate metabolism
shm00680
Methane metabolism
shm01100
Metabolic pathways
shm01120
Microbial metabolism in diverse environments
shm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewmr7_3198
09102 Energy metabolism
00680 Methane metabolism
Shewmr7_3198
Enzymes [BR:
shm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shewmr7_3198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
DAO
Fer4
HI0933_like
Fer4_8
Fer4_10
Fer4_6
Thi4
NAD_binding_7
FAD_oxidored
GIDA
Amino_oxidase
FAD_binding_3
FAD_binding_2
Fer4_2
Fer4_9
Fer4_22
AlaDh_PNT_C
Fer4_21
Shikimate_DH
Lys_Orn_oxgnase
Fer4_16
Fer4_17
Fer4_15
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ABI44182
UniProt:
Q0HRS3
LinkDB
All DBs
Position
3784011..3788309
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AA seq
1432 aa
AA seq
DB search
MIELRIDNQIVTAEPNDNLLRAASKAGIAIPSLCDPTDATRQLGAAPHADKQDCNLCLVQ
IENTDASLRCVKACETPAEAGMKVITQSAYLTKQRQAALSTILSDHFADCEAPCQQACPA
GVDVQSYLYHIAQGDHSQAIKVIKDTLPLPLSIGRVCPAFCETECRRGLVDDPIAIRQLK
RHAADLDLADDEQGGSYQPPRLADTGKKIAIIGAGPAGLSAGYYLSNQGHSVEIFEAMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTDTRLGHEIHLAQLVADFDAVCLAIG
AQKAVPMNYKGSELAGCYLGVDFLKEHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGC
DVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHSDANGQVEAVTFSKMALGDA
DASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPMGQLSHGELALSRWNTLIGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAIAIDKMLKIGLSCDLHAHEFNSVKTIP
SALIPNALKQTETSSKAGSTLYPHTPRQPRLKMPELTALQRLLNYSEVELGFPADAAMQE
AARCLECACQANTDCKLRDYATDYGVEAKSLATENARHFSVDKSAPFIQFDANRCISCGK
CVDVCQLQSGHCAIQFSQDSYQALPQEMTQHMERRAPRVGFSASMADSHCVQCGNCVQVC
PTGALADARDKRQGDSTELKTASTICTYCGVGCRLDLKIDPKANRIRHIEGNKDSVVNQG
MLCVKGRFGFDFIHSDKRLTTPLIRKNGELQPSSWPEAIAYVAKRLTEIKQKDGSNALAS
LASAKATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKD
SDVIFILGSDTTCAHPIIASKIQQAVMQHGARLLVADPKRVGIAEKAELYVAHRPGTDVM
LLNAIMAEIIRHDWQDKAYIAQRTEGIEALYAELAKEDYSLENAALITGVKAEDIARLAR
TIGTAQKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACD
MGALPNYFTGYQKVTDIHARMRFEDHWQTPLSGEIGVTATHMMHDIAKGKIKALYVMGEN
PVLSDPDQAHVLNALSKIDFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQR
LEQALASPGEALPDWQIVQAVANAMGANWDYANEEAIWREINELTPQYRGIRWDRLSANA
EGQISQGIQWPCPDETHPGTPIMHQSQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRL
LEQFHTGTLTRKTPGLDLLGSPKVMISVYDAEQLGIHNGDKLRLTTRRGEIEIDAFVTKR
AQAGVLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRAEKVTTNVSETA
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcgaatcgataatcagatagtcacggccgagccgaacgataacctactt
cgggcagccagtaaggctggcatagcaattccgagtctgtgcgatccaacagacgccaca
cggcaattgggcgcggctccccatgccgataaacaggactgcaacctctgcttagtgcaa
atcgaaaataccgatgccagcctgcgctgcgttaaagcctgtgaaacgcccgccgaagcg
ggcatgaaggtcatcacccaatcggcatatttaaccaaacagcgccaagctgcattgagc
acaattttaagtgaccactttgccgattgtgaggcgccctgccagcaagcctgccccgcg
ggtgtcgatgtgcaaagttacctgtaccacattgcccaaggcgaccatagccaagccatt
aaagtcattaaagataccctgccgctgccgctgtcgattggccgagtctgccccgcgttt
tgcgagactgaatgccgccgcggcctcgtcgatgaccccattgctattcgtcaactcaag
cgccacgccgccgatttagacttggccgacgatgaacaaggtggcagttatcaaccacca
cgcctcgcagatacgggcaaaaaaattgccattattggcgcgggccccgcaggcttaagt
gccggttattacctgtcaaaccaagggcatagtgttgagatttttgaagccatgcccaag
gcgggcggctggctgcgctacgggatccccgaataccgtttacccaaggcaattctcgat
aaagaaatagagctgctatgccgcaatgggttaaccattcatacggatactcgtctcggc
catgaaattcatttagcccaactggtcgccgatttcgacgctgtgtgccttgccatcggc
gcccaaaaggcggtgccgatgaactacaaaggctcagaacttgcgggctgttacctgggg
gtggattttcttaaggaacattgcctcgacaaacaattgaagttgggcaaaaaagtcgcc
gtgattggtggtggcaacaccgccatcgactgcgcccgcaccgccgtgcgcgaaggctgc
gatgtcaccttaatctaccgccgtacccgcgccgaaatgcccgccgaagcctacgaagta
catgaggccgaagtcgaaggcgtcaaattccatttcttaaccaatcccattgaaaatcat
agcgatgccaatggacaggtagaagctgtcaccttcagcaaaatggcgctcggcgacgcc
gatgcctcgggcagacgcgcgcccgtggacactggggaaacctttaccgaggccttcgat
actgttatcgccgccgtctcccaagcgccagatctgagttttatgcaagatcctatgggg
caactcagccatggcgagctggcgctgagccgctggaacaccctgataggctgcgagcaa
accatgtcatcgggtgtagaaaaactgtttgtgatgggcgatgcccgcagaggtcctgcc
accgccgtagccgccattggcgatggccgtaaagcggcaatcgctattgataagatgcta
aaaatcggccttagctgcgatttacatgcccatgagtttaactcggtcaaaaccattcca
agcgccctcattccaaacgcccttaagcaaaccgaaacaagctcaaaagcagggtcaacg
ctttatccccatacgccgcgtcagccccgcttgaagatgcccgaactcacggcgctgcaa
cggctactgaattacagtgaagtcgagctaggctttcccgcagatgccgccatgcaagag
gcggcgcgctgtctcgagtgcgcctgtcaggctaatactgattgtaagcttagggattac
gccacggattacggtgtcgaggccaaaagcttagccactgaaaatgcacggcatttcagt
gttgataagagtgccccctttattcaattcgatgccaaccgctgtattagctgcggtaag
tgcgtcgatgtgtgtcagctgcagagtggccactgcgccatccaatttagccaagattcc
tatcaggcgctgccgcaggaaatgactcaacacatggagcgccgcgcaccgagagtcggc
tttagtgcgagcatggccgatagccactgtgtgcaatgtggtaactgtgtacaggtttgt
ccgacgggcgcactggccgatgcccgggataaacgccaaggcgatagcactgagttaaaa
accgcctcgacgatttgtacttactgcggcgtgggctgtcgtctcgaccttaaaatcgac
cccaaagccaatcgcattcgccatatcgaaggcaataaggactcggtcgttaaccaaggc
atgctatgtgttaagggacgttttggcttcgattttattcacagcgacaaacgtctcact
acgccactaatacgtaaaaatggcgagctgcaaccgagtagctggcccgaagccatcgcc
tatgtggcaaaacgcttaaccgagataaaacaaaaagatggcagcaatgccctcgccagc
ctagcctcggccaaggccaccaacgaagataattttgtgctgcaaaaatttgtccgcagt
gttcttggcaccaacaatatcgatcactgcgcccgcctatgccattcatcgacggtaaca
ggcttgcagcagagtattggtagcggcgccatgaccaatgatattccgagcattaaggac
tcggacgtcatctttatcttagggtcggacaccacctgcgcccatccgattatcgcctcg
aaaattcagcaggcggtgatgcagcacggcgcgcgtttactggttgccgatccgaaacgc
gttggcattgccgaaaaggccgagctgtatgtcgcccacagaccggggacggatgtgatg
ctattaaacgccattatggcggaaattattcgccacgattggcaggataaagcctatatc
gcccagcgtaccgaaggcattgaggccctctatgcagagttagccaaggaggattactcc
ctcgaaaacgcggcgctcatcacgggcgtaaaggccgaagacattgcccgcctcgcgcgc
accataggcacggcgcaaaagaccgcagtttattacgctatgggtatcactcagcatacg
acggggcacgataacgtcacggctatctctaatttgcagctactttgcggcaatattggt
gtgtcaggcgcggggattaatccacttcgcggccagagcaatgtccaaggtgcctgcgat
atgggcgcactacccaactattttaccggttaccaaaaggtcacggatattcatgccaga
atgcgcttcgaagaccactggcaaacgccgttatcgggggagattggcgtcactgcaacc
catatgatgcacgatattgccaaaggtaaaattaaagccttgtatgtaatgggcgagaat
cccgtgctcagcgaccccgaccaagcccacgtacttaatgcattgagcaaaatcgatttt
ctggtggtgcaggatatctttttaaccgagacggccgagcttgcccatgtggtcttgccc
gccgccgcattcgtggaaaaacgcggtcactttaccaataccgagcgtcgggtgcagcga
ctcgagcaggcgctcgcctcaccgggtgaagccttgcccgattggcagatagtgcaagct
gtcgctaatgccatgggtgctaactgggactatgccaacgaagaagctatctggcgcgag
atcaacgagcttactccgcagtatcgcggtattcgctgggacagattaagtgccaatgcc
gaaggtcaaatctctcaagggattcaatggccctgtccagatgaaacccatcctgggacg
ccgattatgcaccagagccaattcactcgaggcttaggcttatttacccccgtcagttat
cgcctacctgctgagatgccctgcaacgagtatccgctgacgctatcaacggggcgcctg
ttggagcaattccacacgggcacactcacccgtaaaacacctgggctggatttactcggt
tcacctaaggtgatgatttctgtctatgatgcggagcaactggggatacataacggcgat
aaacttcgcctcactacccgccgcggagagattgaaatcgatgcctttgtgactaaacgc
gcccaagctggggtgctgttcctgccattccattttgtggaagcagcagcgaataaactc
accattaatgcgctcgaccctgtggcttatattcccgaatataaggtttgtgcggtcagg
gctgaaaaggtgacaacaaacgtgagtgaaacagcctaa
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