KEGG   Shewanella sp. MR-7: Shewmr7_3348
Entry
Shewmr7_3348      CDS       T00389                                 
Name
(GenBank) ABC transporter related
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
shm  Shewanella sp. MR-7
Pathway
shm02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:shm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Shewmr7_3348
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:shm02000]
    Shewmr7_3348
Enzymes [BR:shm01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     Shewmr7_3348
Transporters [BR:shm02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    Shewmr7_3348
 Other transporters
  Pores ion channels [TC:1]
   Shewmr7_3348
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C SMC_N AAA_21 DO-GTPase2 AAA_23 T2SSE AAA_30 nSTAND3 Zeta_toxin AAA
Other DBs
NCBI-ProteinID: ABI44330
UniProt: Q0HRC5
LinkDB
Position
3962292..3963023
AA seq 243 aa
MTQITLKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSDKG
HIFIDDDDLTADPMHLRARKGIGYLPQEASIFRKLTVHDNIMAVLQTRKELNRDQREEEL
EHLLEEFHITHIRDSQGMSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKK
IIEQLKSRGLGVLITDHNVRETLDVCEHAYIVSHGNLIAEGTPAEILDNQQVRAVYLGEQ
FRL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgacccaaatcaccttaaaagcacagaatctcgctaagagttataagagtcgtcaggta
gtgaaagatgtcagcctgacggtcaaaacgggtcaagtcgtcggcttattaggcccaaac
ggcgcgggtaaaaccactaccttttacatggtcgtgggtttagtgaaaagcgataaaggc
catatctttatcgacgatgatgatttaaccgccgatcccatgcatctgcgcgcccgcaaa
ggcattggttacctgccacaggaagccagtatctttcgcaagctgaccgtgcacgacaat
atcatggcggtgctgcaaacccgtaaagagctcaatcgcgatcaacgcgaagaagagctg
gaacacctgttagaagagttccatatcacccatattcgcgacagccaaggcatgtcgtta
tcgggcggtgaacgtcgccgcgtcgaaattgcccgcgccttagcggccaatccaaagttt
attctgctcgatgaacccttcgctggtgtcgacccgatttcggttatcgatatcaagaaa
atcatcgaacaactcaagagccgaggccttggggtactgatcacagaccacaatgtgcgc
gagaccttagacgtctgtgaacatgcctacattgtcagtcacggtaatctgatagccgaa
ggaactcccgcagagatcttagacaatcagcaagttagggctgtgtacttaggtgaacaa
ttcaggctatag

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