Shewanella sp. MR-7: Shewmr7_3649
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Entry
Shewmr7_3649 CDS
T00389
Name
(GenBank) diguanylate cyclase/phosphodiesterase with GAF sensor
Organism
shm
Shewanella sp. MR-7
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
EAL
GAF_2
GAF
GAF_3
ALIX_LYPXL_bnd
YlxR
COG5_N
Folliculin
Spectrin
Motif
Other DBs
NCBI-ProteinID:
ABI44629
UniProt:
Q0HQH6
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Position
4345630..4348260
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AA seq
876 aa
AA seq
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MFRDEDGTTPPRAHEVERLKKRLNRLKYLAHKYKRAEVVQNALLELSHIATQVPSLEEFY
LGVHHHLKQLISADNFFIATLDVNSGDISVPFFADEKDAHPAQLYPEQSLSTLLQQGLTG
YVFRTGETVLCDEAKVDELVQAGEIVNLGSPCHLWLGVPIKHEGIVTAVLVVQTYDTNVS
YGDIEVELMTFICHHIAGVMERLKHQEQLEQAIQQRTKELSQAYDKLKQEVYERRRAERL
QKSLFEIAELASSGSDNPDFYAQLHNVIRHLIPANNCYIALLNEEGTHLTFPFYVSQLGN
QHPGSRPLQDGLTEYVLKHKRPLLLDQHDINDLITSGELYAKAPALNHTQTMHQWIGIPL
FIHDEVRGALTIYSFSMTQNYQTKDLELLTFVSQHIGAAIEKKLTAESLRRSYEELEEKV
AARTTALAELNKDLEKEIRQRRNMEAKLVHDAKHDALTGLPNRAMFMERLNQAIKHVRRH
TLEQFALLFIDLDRFKQINDTMGHLEGDRFLIETATRLRACIRSNDTLARLGGDEFVILL
DSINGINDARDVAERVIQKISLSYTLGAIEFHSGASIGITISGNKLDTSESMLRNADTAM
YQAKANGKGCYVIFDDSASQQKMQDIAFENDFKQALQTGELQLQFWPIVDLLTLQTQALE
CRLTWEHPQWGTIPQEILSQLAEQANLMVELDKYTISLLDKSYHQLLANQGDKVELHLML
SSQHLKHKHALRGLKNALKQTKLALPQLWLFFNEKALVLETENHINGFELLKKLDVNLGI
SHYGSGHSSLNSLLFLPIKGLKLDANITKQLQDEQHIKLMSAYQKAASTLDLQTFVDGLQ
SVEQIKIFHALGYRFGQGGALASPFLLSDTTQQVCA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtttagggatgaagatggaactaccccgcctcgagctcatgaggttgaacgcttaaaa
aagagacttaatcgcctcaaatatttggcgcataagtataagcgtgccgaagtcgttcaa
aatgcgttactcgaattatcccatattgcgactcaggttccttccctcgaagagttctat
ctaggtgtgcatcaccacctaaagcaactgatctctgccgataatttttttattgccact
ctcgatgtgaatagcggggacatttcggttcccttcttcgccgatgaaaaagacgcccac
cccgcccaactctatcccgagcaatcgctatccaccctgctacaacagggcttaacgggc
tatgtctttcgcactggcgaaaccgtattgtgcgatgaggctaaggttgacgaactggtt
caagcgggcgaaatagtcaatctcggctcgccttgtcacctatggctaggcgtccccata
aaacatgaaggcatagtgaccgcggtactcgtagtgcaaacctatgataccaatgtgagt
tacggcgatatcgaggtcgagttaatgacctttatttgccatcacattgccggcgtgatg
gaaaggcttaaacatcaagaacaactagaacaagccattcaacaacgcaccaaggaactc
agccaagcctacgataaactcaagcaagaagtgtacgagcgccgcagagccgagcggttg
caaaagtcgttatttgagattgctgagcttgcaagctcaggctcggataaccctgacttc
tatgcccagctgcataatgtgattcgccatcttatccccgccaataactgttatatcgcc
ctgcttaatgaagaaggcactcacttaaccttcccgttttacgtgtcacaattaggtaat
caacatccaggttcaaggcccttgcaggatgggttgaccgagtatgtgcttaagcataag
cgcccattattactcgaccaacatgatatcaatgacttaatcacctctggcgaactttac
gctaaagcccccgcactaaaccacacccaaacaatgcaccaatggataggtattccactg
tttatccatgatgaagtgcgtggcgccttgaccatttacagcttcagcatgacccaaaac
taccaaactaaagatttggaattgctgacttttgtgtcccagcatatcggtgcggccatc
gagaaaaagctaaccgcagaatctttgcgccgtagctatgaagaattagaagaaaaagtc
gcggcacgcaccacggctcttgccgagttgaataaggatcttgaaaaagaaatccgccaa
cgccgcaatatggaagccaagctcgtccatgatgccaagcacgatgcgctcacagggttg
ccgaatcgcgccatgtttatggagcgactcaatcaagccataaagcacgtgcggcgccat
accctagagcagtttgccctgctctttatcgacctcgaccgcttcaagcaaattaacgac
actatgggacatttagagggggataggttcttaattgaaaccgccacccgcctacgcgcc
tgtattcgcagtaacgataccttagccagactcggtggcgatgaatttgttatcctgctc
gatagcattaatggtattaacgatgcccgtgatgttgccgagcgggtgattcaaaaaatc
tcactctcctataccttaggggcaatcgagtttcattcgggcgccagtattggcatcacc
atcagcggcaataagctagataccagtgaatccatgctgcgcaatgccgacactgccatg
taccaagccaaggcgaatggcaagggctgttatgtcatcttcgacgatagcgcctctcag
caaaagatgcaggacattgccttcgaaaatgattttaagcaggctttacaaaccggtgag
ttacaactgcagttttggccgattgtcgatttactgacactacaaacccaagctttagaa
tgccgtttgacctgggagcatccacagtggggcaccattccacaggagatcctcagccag
ttagccgaacaagcgaacctgatggtcgaactggataagtatacgattagcttgctggat
aagagctatcatcaactacttgccaaccaaggcgataaagttgaattacaccttatgctg
tcgagccaacatctaaagcataagcacgcgctgcgtggactcaaaaacgccctaaagcag
actaagcttgcgctgccacagctatggctgttttttaatgaaaaggccttagtgctggaa
acagagaatcacattaatggctttgagttgttgaaaaagctggacgtgaacttggggatc
agccactacggcagtggccacagctcattaaatagtttgttattcttacccatcaagggc
ttaaagctcgatgccaacatcaccaaacaattgcaggatgagcaacacattaagctgatg
tcggcttaccagaaagcggcctcgaccttagacttacaaacctttgtcgacggcctacaa
tccgtcgagcagataaaaatcttccacgcattaggttatcgctttggccaaggcggtgcc
ttagcctcaccttttttattgtcagacaccacacaacaggtctgtgcctga
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