Shewanella sp. MR-7: Shewmr7_3795
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Entry
Shewmr7_3795 CDS
T00389
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00630
Glyoxylate and dicarboxylate metabolism
shm00680
Methane metabolism
shm01100
Metabolic pathways
shm01120
Microbial metabolism in diverse environments
shm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shewmr7_3795
09102 Energy metabolism
00680 Methane metabolism
Shewmr7_3795
Enzymes [BR:
shm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shewmr7_3795
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
ABI44774
UniProt:
Q0HQ31
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All DBs
Position
4508932..4511784
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AA seq
950 aa
AA seq
DB search
MKLTRKSDVAQVADKPTLGISRRQFMKQAGITTGGIAAASLMGTGMMRRAEAKDVPHDAP
IEVKRTICSACAVGCGLYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGEKRLK
YPMKLVDGKWKKISWEDAINEVGDQMLNIRKESGPDSVYFMGSAKFSNEGCYMYRKLAAM
WGTNNVDHSARICHSTTVAGVANTWGYGAQTNSFNDIQNANAIFLIGANPAEAHPVSMQH
ILIAKEKNNAKIIVVDPRFSRTAAHSDLHCAIRPGTDIPFIYGMLWHIFENGWEDKTFIQ
QRVFEMETIREEAKKFPPKEVANITGVSEEVIYQAAKLMAENRPGTVIWCMGGTQHHVGN
ANTRAYCILQLALGNMGVSGGGTNIFRGHDNVQGATDLGLLFDNLPGYYGLTSAAWTHWT
HVWDLDMEWVKSRFDQNAYLGKDPMTTPGIPCSRWHDGVLEDKSKLAQKDNIRMAFFWGQ
SVNTETRQREVRDALDKMDTVVVVDPFPTMAGVMHRRKNGVYLLPAATQFETQGSVSNSG
RSIQWREQVIQPLFESKTDIEIMYRLAQKLGIAEQYTKRIAKENGLPVIEEITREINRGM
WTIGMTGQSPERIKLHTQNWGTFSNKTLEAAGGPAKGETYGLPWPCWGTPEAKHPGTQIL
YNQSKHVKDGGGNFRARYGVEYNGKNLLAEGSFSKGAEIQDGYPEFTDKLLKQLGWWDDL
TAEEKAEAEGRNWKTDLSGGIVRVAIKHGCIPFGNAKARCIVWTFPDQVPVHREPLYTAR
RDLVAKYPTYDDMQVHRLPTLYKSIQEKDFSGKYPLVLTSGRLVEYEGGGEESRSNPWLA
ELQQEMFVEINPGDAADRGIRNGEFVWLEGAEGGRIKVQAMVTPRVKPGVTFMPYHFAGV
MHGESLAPNYPEGTVPYVIGESANTALTYGYDPVTQMQETKASLCQIVKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaactcgcaagtccgatgtcgcccaagtggccgacaaaccgacgttaggcatt
agccgtcgtcaatttatgaagcaagcaggtattactaccggtggtatcgcagccgcttct
ctgatgggtactggcatgatgcgccgcgcagaagccaaagatgtgccacacgacgcgccg
atcgaagttaaacgtacgatttgtagtgcctgtgctgtgggttgtggtctgtatgccgaa
gtgcaaaatggtgtgtggacgggtcaagaacctgcattcgatcacccattcaatgccggc
ggtcactgcgctaagggtgctgcactgcgtgagcatggccacggtgaaaaacgcctgaaa
tacccaatgaaattggttgatggtaagtggaaaaaaatctcttgggaagatgcgattaac
gaagtgggcgaccaaatgctcaacattcgtaaagaatctggcccagactcagtgtacttc
atgggtagcgctaagttctctaacgaaggctgctatatgtaccgcaaactggcggccatg
tggggcacaaacaacgtcgaccactctgctcgtatttgtcactctaccacggtagccggt
gttgctaacacttggggttacggtgcgcaaactaactctttcaacgacattcagaatgcc
aatgccatcttcctgatcggggcaaaccctgcggaagcgcatccagtatcgatgcaacac
attctgatcgccaaagagaaaaacaacgcgaaaatcatcgtcgttgacccacgtttctct
cgcactgcggcgcactcagatctgcactgcgcgattcgtccaggtactgacattcccttt
atctacggtatgttatggcacattttcgaaaacggttgggaagataagacctttatccaa
caacgcgtattcgagatggaaaccatccgcgaagaagcgaaaaaattcccacctaaagaa
gtggcaaatatcactggcgtaagtgaagaagtcatttatcaagccgcgaaactgatggcg
gaaaaccgtccaggtaccgtgatttggtgtatgggtggtactcaacaccacgtcggtaac
gctaacacccgtgcttactgtattctgcaattagccttaggcaacatgggcgtttctggt
ggcggtactaacattttccgtggccacgacaacgtacagggcgcgaccgacttaggtctg
ctgttcgataacctaccaggttactacggtttaacctcagccgcttggactcactggacc
catgtgtgggatctagatatggagtgggtgaagagccgcttcgatcaaaacgcctattta
ggcaaagatccaatgaccacccctggtattccttgttctcgctggcacgatggcgtgtta
gaagacaagagcaagctggcacagaaagacaatatccgtatggccttcttctggggtcaa
tcggtcaacactgaaacccgtcaacgtgaagtgcgtgatgctttagacaagatggacaca
gtagtggttgtcgacccattcccaaccatggcgggtgtgatgcaccgtcgtaagaatggc
gtatatctgttacctgctgcgactcagtttgaaactcaaggttcagtgtctaactcaggc
cgttctatccaatggcgtgagcaggttatccaacctttattcgagtcaaaaaccgacatc
gaaatcatgtaccgtttagcgcaaaaactcggtatcgccgagcaatacactaaacgcatc
gccaaagaaaacggcttacctgttatcgaagaaatcacccgcgaaatcaaccgcggcatg
tggaccatcggtatgacaggtcaaagccctgagcgtatcaagctgcacacccaaaactgg
ggcactttcagtaacaagacgctcgaagccgctggcggcccagcgaagggcgaaacctac
ggtttaccttggccatgttggggcacaccagaagctaaacaccctggtacccaaattctg
tataaccaatctaaacacgttaaagacggcggcggtaacttccgcgctcgttacggcgtt
gaatacaatggtaaaaacctgctggctgaaggctctttctctaaaggtgccgagatccaa
gacggttacccagaatttaccgacaagctgctgaagcaactcggttggtgggatgacctg
actgcggaagaaaaagccgaagccgaaggccgcaactggaagaccgacttatctggcggt
atcgtgcgcgtggcaatcaagcacggttgtattccatttggtaacgcgaaagcccgttgt
attgtttggactttcccagaccaagtgccagttcaccgcgagccgttatacacagcacgc
cgtgacttagtggctaaatacccaacctacgacgatatgcaagttcatcgtctgccaaca
ctgtacaagtcaatccaagagaaagacttcagcggcaagtacccactggtactgacctct
ggtcgtttagtggaatacgaaggtggtggtgaagaatctcgttctaacccatggctggct
gagcttcaacaggaaatgtttgttgaaatcaacccaggtgacgcagccgaccgcggtatc
cgcaacggtgagtttgtgtggttagagggcgccgaaggtggccgcattaaagtacaagcc
atggtaacgccacgcgttaaaccaggtgtgacctttatgccataccactttgcgggtgtg
atgcacggtgaaagcttagcgcctaactatcctgagggcactgtgccttacgttatcggt
gaatccgctaacacggcactgacctatggttatgaccctgtgactcaaatgcaggaaacc
aaagcgtcgctctgtcagatcgttaaagcgtaa
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