Shewanella sp. MR-7: Shewmr7_3844
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Entry
Shewmr7_3844 CDS
T00389
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shm03021
]
Shewmr7_3844
Transcription machinery [BR:
shm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Shewmr7_3844
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ABI44821
UniProt:
Q0HPY4
LinkDB
All DBs
Position
complement(4565282..4566139)
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AA seq
285 aa
AA seq
DB search
MTFQTQSMALTVPQGSSSLEAYIHSVTSMTMLDAETEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKTRLGWFSDDEVAMVAENLGVSKADVTEMESRMAA
QDPAFDLSSDNDDEQDFAPVHYLEDHSSDLAENIENDNWESNAQGRLLSAIKTLDERSQH
ILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaacgcaatcaatggcactaacagtccctcagggcagcagtagtttagag
gcttatatccattcagtgactagcatgacaatgttagacgctgagactgagtatgagtta
gccaagcgtttgcaggaaacgggtgatctgcaagcggcgaagcaactgattatgtcgcac
ttacgttttgtggtgcacgttgctaagggctactcaggttacggtctgccacaggcggat
ttgatccaagaaggcaacatcggtctgatgaaagcggttaagcgcttcgatcccgatgtg
ggtgtccgtctagtgtcttttgcagtgcactggattaaagccgaaattcacgaatatgtg
ctgaaaaactggcgcattgttaaagtcgcaaccaccaaagcacaacgtaagttgttcttt
aatatccgtaaagcgaaaactcgcctcggttggtttagcgatgatgaagtcgcaatggtg
gcagaaaacttaggtgtatctaaggccgatgtgactgagatggaatcacgtatggcggcg
caggatcctgcgtttgacctcagcagtgataacgatgatgagcaggactttgcccctgtg
cattatctcgaagatcattcgtcggatttagccgaaaacatcgaaaacgataactgggaa
tccaatgcccaaggtcgtttattatcggccatcaaaaccttagacgagcgtagccagcat
attctgcgtgcccgttggttagacgatgataaaaccacactgcaggaattggcagaaacc
tatcaagtctcggctgagcgcattcgccagttagagaaaaacgccatgaacaagcttaag
gcttgtatggaagcctaa
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