Shewanella sp. MR-7: Shewmr7_3857
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Entry
Shewmr7_3857 CDS
T00389
Name
(GenBank) ribonuclease T2
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shm03016
]
Shewmr7_3857
Enzymes [BR:
shm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
Shewmr7_3857
Transfer RNA biogenesis [BR:
shm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Shewmr7_3857
Prokaryotic type
Shewmr7_3857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Cin1_N
Motif
Other DBs
NCBI-ProteinID:
ABI44834
UniProt:
Q0HPX1
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All DBs
Position
4578801..4579958
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AA seq
385 aa
AA seq
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MTALFSLPIHNRTGIYRHSFGLLGLLLIGFTPIALQAAPASGEFVANKRCELFQSKNKQT
NPDDWQSNIGERYPVAEILGNSTNPDWLRVRTNANSSPLRWIKGDCGQYNAAAPAPAESI
ATAQPTANVEPAQTSLTSESTAVKSENPQESGTPEKRQGNVCQIEDNYDSNVLALSWQST
FCELYGSRKAECRALSQNSDAPQWQHFSLHGLWPNRQQCGTRYGFCSSVKQQPSDFCDYP
EVTLNASVQKNLEEVMPSARYGSCLERHEWWKHGTCRNQDPNDYFLLATQLTQEVNASAW
VQQFIHARIGKKVTQQELNQSFDASFGQGAHTKVTLDCAKGLLNEIRINLPQVINNSDSL
PSLLAKAPKAKKTNCPATLLIDNPN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacagctttattttctcttcccatccacaaccgcacaggtatttatcgccatagcttt
ggcttgctggggctgttgttgataggttttacccccatcgcccttcaggcggcccctgcc
tcgggagagtttgtcgccaacaagcgctgcgaactgtttcagtctaaaaataaacaaacc
aatcccgatgattggcagagcaatattggcgagcgttatcccgttgccgaaattttaggt
aatagcaccaatcccgattggctcagggtgcgaaccaatgccaacagctcgccactgcgt
tggataaaaggtgattgcggacaatacaatgccgcagctccagcgcccgccgaatccata
gcgaccgctcagcccacagcgaatgtcgagcccgcgcaaacaagcctcactagcgagagc
acggcggttaagagtgaaaacccgcaagaaagtggcacgccagagaagcgccaaggcaat
gtgtgccaaatcgaggataactacgactccaatgtgctcgccctaagttggcagagcacc
ttttgcgaactctatggcagtcgtaaagccgagtgccgcgccttaagccagaacagtgac
gcgcctcagtggcaacactttagtctgcatggcctctggccgaatcgccagcaatgtggc
acccgttacggcttttgcagcagcgtgaaacaacaaccgagtgatttttgtgattatccc
gaggtgacgctcaatgcctccgttcaaaaaaatctcgaggaagtgatgccaagtgcccgc
tatggcagctgtttagagcgccatgaatggtggaaacatggcacctgtcgcaaccaagac
cctaatgactactttttactggcaacccagctgacccaggaagtgaatgcctccgcatgg
gtacagcaatttatccacgcaagaatcggtaaaaaggtcactcaacaggagctaaatcaa
agctttgatgccagctttggccaaggtgcacacacaaaagtcaccctggactgcgccaaa
ggactcttgaatgaaatccgcattaacctgcctcaagtcatcaacaactccgactctttg
ccgagtctgctcgcgaaggcgccgaaggcgaaaaaaaccaattgcccggccacactgtta
atcgacaatccaaactaa
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