Shewanella sp. MR-7: Shewmr7_3990
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Entry
Shewmr7_3990 CDS
T00389
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00540
Lipopolysaccharide biosynthesis
shm01100
Metabolic pathways
Module
shm_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Shewmr7_3990
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shm01005
]
Shewmr7_3990
Enzymes [BR:
shm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Shewmr7_3990
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Shewmr7_3990
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Shewmr7_3990
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Shewmr7_3990
Lipopolysaccharide biosynthesis proteins [BR:
shm01005
]
Lipid A
Shewmr7_3990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
ABI44967
UniProt:
Q0HPI8
LinkDB
All DBs
Position
complement(4735082..4736407)
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AA seq
441 aa
AA seq
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MLTLPLFIRQKLISTIFMNRFFYSVLLYLLSPLLIVYLAFRAIKSPDYRGRWGERFGLTR
LAPTDLLIHSVSMGETLAAIPLIRQIQQAHPQLKITVTTSSPTGSAEVRKALGDQVQHCY
LPFDLPWSVNRFLRQLSPKWCIIMETELWPNLVALAAKHGVRLMLANARLSAKSAAQYAK
RPQLSRPMLQRLDVVAVQTQAEALRFIDLGVPADRVTVCGSLKFDLTITPERLTLARELR
QTWRKEAAPVWVAGSVHPGEFDAMLSAHKQLLAKWPEALLVIAPRHPEQFAAVADVVASQ
GFEFVRRSEAQAITATTQVLVGDTMGELLTFYGAADQAFVGGTLIENGGHNPLEPVAMGV
PVMVGPNHWDFAQITQMLADAGGLRIVSSGQELGENLIQYFEQPALRQQAAEAGLAVVEA
NRGALQRQFALAESLLSRQTA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattgccactattcatcaggcaaaaactcataagcacgatttttatgaatcga
tttttttacagtgtgctgctttatctattatcccctctgctgattgtctatttggcgttc
cgtgccattaaaagccctgattaccgtggccgctggggcgaacgcttcggattaacacga
ctggcaccaacggatttactgatccactcggtttctatgggagaaacgctggcggcgatt
ccgttaatccgccagatccaacaggcgcatccacagcttaagattacggtcacaacctca
agccccacgggttctgctgaggtgcgtaaagcccttggtgatcaagtgcagcactgttat
ttgcccttcgatttgccctggagtgttaaccgctttctgcgccagttatcccccaaatgg
tgcatcattatggagactgagctgtggccgaatctcgtggcgctggcggctaagcacggt
gtgcgcttgatgctcgctaatgctaggttgtcggccaaatcggcggcgcagtatgccaag
cgtccacagttgagtcgccccatgttgcaacgtttagatgtggttgcggtgcagacgcaa
gccgaggcgctgcggtttatcgaccttggggtgcctgctgatagagtcactgtttgcggc
agtttgaagtttgatttaactatcacccctgaacgattaaccctagcgcgagagctaagg
cagacttggaggaaagaggcggcgcccgtgtgggtggctgggagtgttcaccccggtgag
tttgatgccatgctgagcgcccataagcagctgctcgctaaatggcctgaggcgttattg
gtgattgccccgcgtcatcccgaacagtttgcggcggtcgccgatgttgtcgccagccaa
ggttttgaatttgtacgccgtagtgaagctcaagcgattaccgccacgacgcaggtgctg
gtgggcgataccatgggtgaattgttaaccttctatggcgcagccgatcaagcctttgtg
ggcggaacgttaattgaaaatgggggccataatcccttagagcccgtggccatgggcgta
cctgtgatggtggggccgaatcattgggattttgcccaaattacccaaatgttggcagat
gcggggggcctgcgaattgtgagttcaggccaagagttgggtgagaatttaattcagtat
tttgagcaacctgcgttacgccaacaagccgctgaagcaggccttgctgtggtagaggct
aatcgtggtgcattgcagcgtcagtttgctctcgccgaatccttactctcgcgccaaaca
gcctaa
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