Shewanella sp. ANA-3: Shewana3_0106
Help
Entry
Shewana3_0106 CDS
T00428
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn00450
Selenocompound metabolism
shn00970
Aminoacyl-tRNA biosynthesis
shn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Shewana3_0106
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shewana3_0106
Enzymes [BR:
shn01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
Shewana3_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABK46350
UniProt:
A0KRD1
LinkDB
All DBs
Position
1:121113..122543
Genome browser
AA seq
476 aa
AA seq
DB search
MIQMMTQVPDTPQALYRALPSMDSLLADAILAPLLQSYGKAAVKAALDSQLRTARELIAQ
ERRLPAWCANPSLLNGYLVDQLSKDYSHSLKPVWNLTGTILHTNLGRAQQSEAAIRAVTS
VMRYPTPLEFELAAGERGHRDNAISGLIQRLTGAEACCVVNNNAAAVLLMLSAVAAGKEV
IVSRGELVEIGGAFRIPDIMRQAGCILVEVGSTNRTHLKDYEQAITENTAAIMKVHTSNY
HISGFTASVDEARLGQLCRERGVALISDLGSGSLTDLRRFGLKQEPTPQAMLADGVDLVS
FSGDKLLGGPQSGLIVGKQALINKLQSHPLKRALRCDKLILAALEATLIHYLNPETLDRE
LPIMAKFARSQAELRQIGERLQRALEPLFAPSYGIELVECQTQVGSGSQPDTFLPSIALC
FNAQEGGSLTLLEQHFKQAQRPVIGRMTQDQLRLDLRGIDDEAELLAELSTLGVQL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaatgatgacccaagtacccgatacaccccaagccctgtaccgcgcgctgccg
tcgatggacagtctgctcgccgatgcaatattggcgcccctgctgcaaagctatggtaaa
gcggcggtaaaggcggcgctggatagccagttacgcacggcgcgtgagctgatagctcag
gagcgacgtttacccgcttggtgtgctaacccgtcattattgaacggatatttggttgat
caattgtctaaggactatagccatagtcttaagcccgtgtggaacctcacgggaactatc
ctgcataccaatcttggtcgcgcccagcagtctgaggcggccattcgggcggtgacctct
gtgatgcgttatcccacgccgctggaatttgagttggcagcgggtgaacgcggccatcgg
gataatgccattagtgggttaatccagcgcttaacaggagctgaggcctgctgcgtggtg
aataacaacgccgctgctgtgttgctgatgttgtcggcggtggcggcgggtaaagaagtg
attgtctcccgcggcgagctggtggaaatcggcggcgcctttcgtattcctgacattatg
cgccaagcgggctgtatcttagtggaagttggcagcactaatcgtactcaccttaaggac
tatgagcaggcgatcaccgaaaataccgccgccatcatgaaggtgcacaccagcaactac
catatcagtggctttaccgcttcggtggatgaggccagattaggccaactctgccgcgag
cgtggggtcgcgctgatttcggatcttggcagtggttcactcaccgacttacgccgtttt
ggcctgaaacaagagccgactccccaagccatgctggcggatggggtcgatctggttagc
ttctccggcgataaactccttggcggcccgcaatcgggtttgattgtcggcaaacaggcg
ctgatcaacaaacttcaaagtcatccgctcaagcgtgcattgcgctgcgacaagctgatt
ctcgcggcgctcgaggcgacgctgatccactatttgaaccccgaaaccttggatcgggaa
ctgccgattatggctaaatttgcccgcagccaagctgagttacgtcaaatcggtgagcgt
ctgcagcgcgccttagagccgctgtttgcaccgagttatggcatcgagctagtggagtgc
caaacccaagtcggtagcggctcgcagcccgatacctttttgccctcaatcgccctgtgc
tttaacgcgcaagagggcggcagtttaacgttgctcgagcagcattttaagcaggcgcag
cgccctgtgattggccgtatgacccaagatcaacttcgcctcgatctgcgcggtatcgat
gatgaggccgagttgttagccgaactcagcaccttaggtgtgcagctatga
DBGET
integrated database retrieval system
