Shewanella sp. ANA-3: Shewana3_0107
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Entry
Shewana3_0107 CDS
T00428
Name
(GenBank) selenocysteine-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shn03012
]
Shewana3_0107
Translation factors [BR:
shn03012
]
Eukaryotic type
Elongation factors
Shewana3_0107
Prokaryotic type
Shewana3_0107
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_3rd_SelB
WHD_2nd_SelB
WHD_2nd_SelB_bact
MMR_HSR1
WHD_1st_3rd_SelB
GTP_EFTU_D2
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABK46351
LinkDB
All DBs
Position
1:122540..124561
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AA seq
673 aa
AA seq
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MIMVTAGHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMPLRDGTRLAFIDVPG
HEKFINNMLVGVSHVRHALLVLACDDGVMPQTREHLQILALLPLNSLTLVLTKRDLVDDQ
TAAKLTLEGMALLAEYGIEASGVFEVCANDAGDAGVDTLKQHILDIAELQSTQAEDASSF
RMTLDRAFSVKGAGCVVTGTVISGSVCIGDSLYSSGQKAKLRVRGIHCQGMEVHRALSGT
RVALNLTGVDNHRAPARGDWLSSLPQAELCARPVVQIRSFEPLTHWQNVHCHHGADHTLG
RVSLLDEADEQGRYLAEIVLDKPLLLCQDDPIVLRHIGGKQTLGAGRVLALKVPNRKKRT
PERVSKLQQLAQLSNPVNVLALLGQTEALSIDEIRWRWQLTDEGLAAMLAQAGLTRLGAY
GLSTQLLEQEKQQFIDLLREYHQQHPDQLGLGRNRLQRMSHNVLPSELANKVLDSLCQEG
QMVLRGALLQLADHRIVLDSEAQQCWQRLAPWLAQQTSPVWVTEMGEYLELEPAKLRLLC
FQLVQQGFITAVVKDRYLLSEQLCHYANLVRAHVETHGKLETAEFKDLIGLGRKVSIQLL
EFFDRSGFTRRKYRSNSREIRDGELFYSHENWRKNIGVEPTQDCWQPYPDLKSGRLTGDD
VLPIEDKPIVENA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgattatggtcaccgcgggccatgtcgaccacggcaagagcacgttgatccgtgcctta
acggggatgaacaccgacaggctccccgaagaaaaacgccgtggcatgaccatcgatctc
ggttacgcctttatgccactgcgggatggcactcgcttagcctttattgatgtgcccggc
catgaaaaatttatcaataatatgctggtaggcgtgagccacgtgcgccacgcgctgctg
gtgttggcctgtgacgatggcgtgatgccacaaacccgcgagcatctgcaaatcctcgcg
cttttaccgctaaacagtttgaccttagtgctgaccaagcgggatttggtcgatgaccaa
accgccgccaagttgaccctagagggaatggcgctgcttgctgaatacggtatcgaggcc
agtggcgtatttgaggtttgcgctaatgatgcaggcgatgcgggggtagatacccttaag
caacatattttggatattgccgagttgcaatcgacccaagcggaagatgccagcagcttt
aggatgacgctcgatcgcgcctttagcgttaaaggcgccggctgtgtggtcacgggcact
gtgattagcggcagtgtgtgtatcggcgatagcctctacagctctgggcaaaaagcgaaa
ttacgggtgcgcggtattcattgccaagggatggaagtccacagagccttgagtggcact
cgggtcgccttaaatcttactggcgttgataaccacagggcgcccgcccgcggtgactgg
ttaagcagcctgcctcaggcggagctgtgcgccagacctgtagtgcaaattcgcagtttc
gaacccttaacccattggcaaaatgtgcattgtcaccacggcgccgaccataccctaggg
cgagtatcgcttctggatgaagccgatgagcaggggcgttatctggccgaaattgtgctc
gataagccattgctgctatgtcaggacgacccgatagtgctcaggcatattggtggcaag
caaacgctgggcgctgggcgggtgctggcattaaaagttcccaatcgtaagaagcgtacg
ccggagcgtgtcagtaagttgcaacagctggctcagctctccaatccggtgaatgtgctg
gcgctactcggtcagactgaggcgctcagtattgatgaaatccgttggcgttggcagcta
accgatgaagggctggctgccatgctggcgcaggcggggctgactcgcctcggagcctat
gggctatcgacccagttacttgagcaagaaaaacagcagtttatcgatctgttacgtgaa
taccaccaacagcaccccgaccaattggggctggggcgtaatcgcctgcaacgcatgagc
cacaacgtattgcctagcgagcttgccaataaggtgctcgatagtctctgccaagaaggg
cagatggtactgcgcggcgccttgctgcagctggcggatcacaggattgtcctcgatagc
gaggcgcagcaatgctggcaacgcttggccccttggttggcgcagcaaacctcgcccgtg
tgggtgactgagatgggggaatatctcgaactcgagcccgccaaactcagattgctatgt
tttcaactggtgcaacagggctttattaccgccgtagtgaaggatagatatctgctgagc
gagcagttgtgtcattacgccaatctggtgcgagcgcatgtggaaacccacggcaagctc
gaaaccgcagagtttaaggatctgattggcctaggccgcaaggtcagtattcagctgttg
gagttttttgaccgcagtggttttacccgtaggaagtatcgcagtaacagtcgggagatt
cgggatggggaactgttttattcccatgagaattggcggaagaacataggagtcgaacct
acccaggactgctggcagccctacccggatttgaagtccggacgcctcaccggagacgac
gttcttccaatagaagacaaaccgatagtagaaaatgcataa
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