Shewanella sp. ANA-3: Shewana3_0292
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Entry
Shewana3_0292 CDS
T00428
Name
(GenBank) transcriptional regulator, TetR family
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shn03000
]
Shewana3_0292
Transcription factors [BR:
shn03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Shewana3_0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_23
TetR_C_11
HTH_11
Sigma70_ECF
HTH_36
HTH_38
NPP-6_helical
HTH_22
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ABK46535
LinkDB
All DBs
Position
1:324598..325209
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AA seq
203 aa
AA seq
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MAEKAVKLTHSQLKRLAILDASQEEFMVNGFAGASMDRIAQRANVSKRTVYNHFPSKEVL
FEATTSDLWARTKEAATLAFNPEQSLESQLQHIARRCWELYQQPDFLRVARVVMAEFIRS
PVQATEAMERLAKQEGGLEAWLAGAVAHKALKIDNIPLAATQFWGMFKAFAFWPKLFHMK
SHDEYQQDIIDANIRMFLAMYRA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagcagtgaaactgacacattcccaactgaagcgtttagcgatcctcgac
gcgtcacaggaagaatttatggtcaatggttttgccggcgccagcatggatagaattgcc
cagcgtgccaatgtctccaagcgcaccgtttacaaccatttccccagcaaagaagtgtta
ttcgaggcgacaacaagtgacctgtgggcacggaccaaggaagcggccaccttggcattt
aatcccgagcaaagccttgagtctcaattgcaacacatcgcgcgccgctgctgggagctg
tatcagcaaccggatttcctgcgagtggcaagggtagtgatggcagagtttattcggtca
ccggttcaagcgaccgaggccatggaacgattagccaagcaagagggtggattagaggcg
tggcttgccggagccgtggctcataaggcgttgaaaatcgataatatccctctggcggcc
actcagttttggggcatgtttaaggcattcgccttttggcctaaattgttccatatgaaa
agtcatgacgagtaccaacaagatattatcgatgccaatatccgtatgtttctcgccatg
tatcgcgcttag
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integrated database retrieval system
