Shewanella sp. ANA-3: Shewana3_0469
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Entry
Shewana3_0469 CDS
T00428
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03420
Nucleotide excision repair
shn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Shewana3_0469
03430 Mismatch repair
Shewana3_0469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_0469
Enzymes [BR:
shn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Shewana3_0469
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Shewana3_0469
MMR (mismatch excision repair)
Other MMR factors
Shewana3_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABK46710
UniProt:
A0KSE1
LinkDB
All DBs
Position
1:544732..546900
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AA seq
722 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQV
RLLKRILKSLNLDEKQYPPRQAQAYINGKKDQGLRPKHIDAGGFPIEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRVLAGQT
ANVMIVGDDDQSIYGWRGAQVENLHRFLRDFPTATTIRLEQNYRSKGNILKASNALIANN
PERLGKELWTDEADGEPISLYCAFNEMDEARFIVGRINDWYEKGGNLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYMRLISNKNDDAAFERVVNTPPRGIGD
RTLDILRSTARQQELTLWQACLRLLDEKVLAGRAASAVRGFMDLIVTLQEETQDMALYRM
TDTVIQASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCY
VGMTRAMEKLYITYAESRRIYGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMANNRFS
AQKSAVANDTGFSVGQRVHHPKFGDGKVTNFEGSGAQARVQVNFSDFGSKWLVVAYARLE
AR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactagacggcctgaatgataaacagcgcgaggctgtcgcggca
ccgcaatccagcatgttagtgcttgcgggcgcaggcagtggcaaaacgcgagtattaacc
caccgtatcgcgtggttaatgcaggtcgaacagcagagcccttactcaattttagccgtg
acgtttaccaataaagccgcagccgagatgcgtgagcgggtggagaaggtcgctggcacc
aatatggggcggatgtggattggtaccttccacgggttagcgcatcgtctgttacgcact
cacttccaagatgcgggattgccgcagagcttccaaattctcgattcggacgatcaggtg
cgcttgctgaaacgcatccttaaaagtttgaatctggatgaaaaacaatatcccccccgt
caggcgcaggcctatatcaatggcaagaaagaccaaggattacggcccaagcatatcgat
gcgggtggttttccgattgagcaaaacctgctgaagatttatcaggtttatcaagagtct
tgcgaccgcgcaggcttagtcgactttgccgaaatcctgctgcgtgcccacgagctgtgg
ctcaataaaccgcatctgctggcgcattatcaggagcgttttaagcatattctggtggac
gagttccaagataccaacgccattcaatatgcttggatccgcgtgttggctggccaaacc
gctaacgtgatgatagtgggcgatgacgaccaatctatttacggttggcgcggcgctcag
gttgaaaacctgcaccgcttcctgcgggatttcccgacggctactacgattcgcctcgag
caaaattatcgctccaagggcaatattttgaaggcgtcgaacgcccttatcgccaataac
cccgagcgtttaggtaaagagttgtggaccgacgaagccgatggtgagccgatttcgctc
tactgcgcctttaacgaaatggacgaggcgcgctttattgtcggccgtatcaatgattgg
tacgaaaaaggcggcaatttaagtgactgcgcgattttatatcgctcaaacgctcagtcg
cgtgtgctcgaagaagccttattacacaaaggtttagcctatcgtatttacggtggcctg
cgcttcttcgaacgccaagagattaaagacgctatgggttatatgcgtcttatcagcaat
aaaaatgacgatgccgccttcgagcgcgtggttaatacaccgccccgcggcattggcgat
cgcaccttagatattctgcgttcgaccgcccgtcagcaggaactcaccctgtggcaggct
tgtttacgtttgctggatgaaaaggtgctcgcaggccgcgccgcctctgcggtgcgtggc
tttatggatcttatcgtcaccctgcaggaagaaactcaggacatggcgctgtaccggatg
acggacacagtgatccaagcctctgggcttaaggccatgtacgaggcggagaaaggcgaa
aaggcccacgcccgtatcgaaaacttagaggaactcgttaccgcggcgcgcaccttcgaa
atgccagaggagcttgaggatatgggcgagcttaacgccttcctatcccatgcggcccta
gaggcgggcgaaggtcaggccgatgcctttaccgatgccgtacagttaatgacactgcac
tcggccaaggggctggagtttactatggtgtttatggcgggtgtcgaggagggcattttc
ccgagtaagatggcgctcgaagagggcgatagactcgatgaggaacgccgcctctgttac
gtgggcatgacccgcgcgatggaaaaactctatatcacctatgccgaatcccgtcgtatt
tatggccgcgaagattatgcccgcccatcgcgctttattaaggaaattccgccgcaatat
gtggacgaaattcgcttaaaggcgcaggtgtcgacgccgatggcgaataatcgcttcagt
gcgcaaaagtcggcggtcgccaatgataccggctttagcgtcggccaaagagtacatcat
cccaagtttggtgacggcaaagtgactaactttgaaggcagtggtgcgcaggcgcgggtg
caggtgaattttagtgattttggcagtaagtggttggtggtggcctacgcgcgtttagag
gcgcgttga
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