Shewanella sp. ANA-3: Shewana3_0522
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Entry
Shewana3_0522 CDS
T00428
Name
(GenBank) secretion protein HlyD family protein
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_0522
Transporters [BR:
shn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shewana3_0522
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_AAEA
BSH_CzcB
BSH_YhbJ
Beta-barrel_YknX
BSH_CusB
HH_MFP_RND
HH_YBHG
BSH_LcnD
Beta-barrel_AprE
DUF228
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
ABK46762
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All DBs
Position
1:612889..613944
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AA seq
351 aa
AA seq
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MSKSKLIIAVPLLLAAVAGGGYYWWTQVRFIETTDNAYVEADISHVSVKVPGYVVLSDVT
DNQHVRKGELLAQLEDNQFSAKVSQAEALLASAKADMQTLAAKVELQHALISQASAGVVA
AQADKLRAEQQLSRAKKLKVSNYSSQDDVDQLQAGFDSAAAGLDEAKALLVAKERELAVF
NAQLNQAGSVVEQSNAALELAKIQLNDTRVTAPFSGVIGKRGAMVGQYVQPGQALYSLVP
DGAVWITANFKETQIQHMQPGQSVQVSLDAFPDKTFTGVIDSLSPASGAKFSLLPAENAT
GNFTKIVQRIPVRIRLDLSAEEARVVPGLSAVVKVDTASHPTTAIAANVGR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagtaaactcatcatcgccgttccactattgctcgccgccgttgcgggtggc
ggttattactggtggacgcaagtacgttttatcgaaaccactgacaacgcctatgtcgag
gccgatatctcccatgtgagcgtgaaagtcccaggttatgtggtgttatccgatgtgacc
gataaccaacatgtgcgcaagggcgagttattagcgcaacttgaagataatcagtttagc
gctaaagtcagccaagccgaggcgttactcgccagtgctaaggccgatatgcaaacctta
gccgctaaggtggaattgcagcacgcgttgatcagccaagcgagtgcgggcgtggtggcg
gcgcaggccgacaaactgcgtgccgagcaacagttaagccgagctaaaaagttaaaagtc
agcaactacagctcacaggacgatgtcgaccaattacaagcaggttttgattccgctgcc
gctgggctagatgaagccaaggcactgttagtggctaaagagcgtgagctcgctgtattt
aatgcccagctgaatcaggctggttctgtggttgaacagtcgaatgcggcattggagctg
gctaaaattcagcttaatgatacccgcgtgaccgcgcctttctctggggtgattggtaaa
cgcggcgctatggtggggcagtatgtacagcccggccaggcactctacagtttggttccg
gatggggctgtgtggatcacggcgaactttaaagaaacccaaatccaacatatgcaacct
ggacagtcggtgcaggtcagtctcgatgcgtttcccgacaaaacctttacaggtgttatc
gatagtctgtcgccggcgtccggagccaaatttagtctgctgcccgccgaaaatgccacg
ggtaacttcactaaaatcgtgcaacgtatccctgtgcggatccgtttagatctctcagca
gaagaggcgcgtgtcgtccccggtttaagtgctgtggtcaaggtcgatactgcgtcgcat
ccgacgacagccatcgctgctaacgtcggtcgctaa
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