Shewanella sp. ANA-3: Shewana3_0845
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Entry
Shewana3_0845 CDS
T00428
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shn03000
]
Shewana3_0845
Transcription factors [BR:
shn03000
]
Prokaryotic type
Helix-turn-helix
Other families
Shewana3_0845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
Mg_chelatase
AAA
MCM
GAF_2
AAA_2
HTH_8
AAA_16
AAA_7
AAA_19
IstB_IS21
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABK47083
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Position
1:complement(978827..980383)
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AA seq
518 aa
AA seq
DB search
MALSQTDLTRIALDITSGLAHRDRFSRLLDTVRANLHCDAAALLTFHGHYFTPLAIDGLN
EDVLGRRFILNEHPRLEAIARAGDIVRFPADSELADPYDGLIPNQTGALKVHACIGLPLF
ADEQLIGAVTIDAFNSLQFDQFSNTELRSLSAIAAASLSNALLVEKLERMALNSHSSHVQ
EKSPNLNHDAEIIGNSSQMQSLNREIEVVAHSDLNVLILGETGTGKELVAQSIHQKSARS
HKPLVYLNCAALPESVAESELFGHIKGAFTGAISHRSGKFEMADKGTLFLDEIGELPLTL
QAKLLRVLQYGDIQKVGDDRSLKVDVRIIAATNKDLKTEVLAGRFRADLYHRLSVFPLLV
PPLREREQDITLLSGFFAERYRQKLGMKQLNFSPSSLILLNQYTWPGNVRELEHAIHRAT
VLARVSAQDGCCTIAPQHFDLPFKQSPLETNASTSLSVNDMQLRPLEGASLAQATDAFQR
DFIKQVLTAQNGNWAASARVLGLDPGNLHRLAKRLRLK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcccttagtcaaaccgaccttacccgcatcgcactggacatcacctctggtttagcc
cacagggaccgcttctcacgcttgctcgacacggtaagagctaacctgcactgtgatgcg
gcggcgttactcaccttccatggacactattttaccccactggccatcgacggtttgaac
gaggatgtgctcggcagacgctttatcctgaatgagcatccaaggcttgaagccattgcc
cgtgcgggggatatagtgcgctttcccgccgacagtgaacttgccgatccctacgatggc
ttgatccccaatcaaaccggggcattgaaggttcatgcctgtatcggactccccttattt
gccgacgaacagcttatcggtgccgtgaccatcgatgcctttaattccctgcagttcgat
caattcagtaataccgaacttcgcagcttaagtgcgattgccgccgcatccttaagcaac
gccctgctggttgaaaaactggagcgcatggcactcaatagccactcaagccatgtgcag
gaaaagagcccgaaccttaaccacgatgccgaaatcatcggtaactcgtcccagatgcaa
agcttgaatcgggagattgaagtcgttgcccatagcgaccttaacgtactgattttaggc
gagacaggaacgggcaaagaattagtcgcccagtcaatccatcaaaaatccgcgagatct
cacaaacccttggtctatctcaattgcgcggcgcttcctgaatcggttgccgaaagcgaa
ctctttggccatatcaaaggcgcgttcaccggcgccatcagccatcgcagtggcaagttt
gaaatggccgataagggcacactctttctcgatgagattggcgagcttccgctcacgctt
caggccaagttgctgcgggtcttacaatatggcgacattcagaaagtgggggatgatcgc
agccttaaagtcgatgtgcgtatcattgctgccaccaataaggatctgaaaacggaagtg
ctggctggccgttttagggccgatctttaccataggttgagcgtgtttcccctgctggtg
cctccactgcgcgagcgcgagcaggacatcaccttgttgagcggattctttgccgagcga
tatcggcaaaagcttgggatgaaacagcttaatttcagtcccagtagcttaatcttgctc
aatcaatatacctggccgggcaatgtgcgcgagctcgagcacgccattcacagggcgacc
gtactggcgcgagtctcggcacaggatggctgctgcaccatagcgccacaacattttgat
ttaccgtttaaacaaagtcctttagaaacaaacgcatcgacaagtttaagcgtaaacgat
atgcagcttcgcccgttggaaggagccagtttagcccaagcgaccgacgcctttcagcgt
gacttcattaaacaagtgctcacggcacaaaacggcaattgggccgcctcggccagagtc
ttaggactcgacccgggcaatctgcatcgcctcgcaaaacgcttaaggctaaaataa
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