Shewanella sp. ANA-3: Shewana3_1029
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Entry
Shewana3_1029 CDS
T00428
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shn03021
]
Shewana3_1029
03009 Ribosome biogenesis [BR:
shn03009
]
Shewana3_1029
Transcription machinery [BR:
shn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Shewana3_1029
Ribosome biogenesis [BR:
shn03009
]
Prokaryotic type
rRNA transcription factors
Shewana3_1029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
S1_RRP5
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ABK47264
UniProt:
A0KTZ5
LinkDB
All DBs
Position
1:1200689..1202188
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AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVSIDRKTGAYETFR
RWMVIDDNGVALENPYREITLEAARYENPEIQPGDYIEDQIESVAFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEAESLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVK
SLFINALDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIDGFDEDIVEALRERAKAAIST
RALATEEALDGVEPSEELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGALIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgaaaaagccgttccacgc
gagaaaatttttgaagcgctagaaactgcgctggcaactgcaaccaagaaaaaatacgaa
ggcgatatcgacgttcgtgtttctatcgaccgtaaaaccggcgcctatgaaacgttccgc
cgctggatggtgatcgatgataacggtgttgcgttagaaaacccataccgcgaaatcacc
ttggaagctgcgcgttacgaaaacccagaaatccaacctggcgattacatcgaagatcag
atcgaatctgttgccttcgaccgtattacgacgcaaaccgctaagcaagtgatcgtacaa
aaagtacgtgaagccgagcgtgcgcaagtcgttgaacagttccaagataaagaaggcgag
ctgatcactggtgttgtgaaaaaagcgacccgtgaaagtgttgttgttgacttaggtaac
aacgctgacggcgtattgttccgtgaagatttaatttcacgcgaatctttccgtcctggt
gaccgtgtccgtgcactgctgtattcagtacgtccagaggcacgtggcgcgcagttattc
ttaactcgcactaagccagatatgctgattgagctgttccgtgttgaagtaccggaaatc
gccgatgagctgatcgaagtcatgggcgctgcgcgcgacccaggtgcacgcgctaagatc
gccgtgaagtcaaacgaccgtcgtatcgacccaatcggtgcttgcgtaggtatgcgtggt
gcacgtgtacaagcagtatcgaatgaactcggtggcgagcgtgtggatatcgtgttgtgg
gatgataatccagcacaatatgtgatcaacgcaatggcgcctgccgatgtggcttctatc
atcgttgatgaagacaaccactcaatggatatcgccgttgaagcggaaagtctggcacaa
gcgattggccgtaacggtcaaaacgtacgtttagcgactcagctgactggttgggaactg
aacgtaatgacagtggaagacatgaacaagaagcaccaagccgagagcgctaaggtgaag
agcttattcattaacgcactggatgtagatgaagattttgctcaagtactggctgacgaa
ggttttacttctctcgaagaagtggcttacgtgcctgtatctgaattattagcaattgat
ggcttcgatgaagatatcgttgaagcattacgtgagcgtgcaaaagcggcgatctcaact
cgagctctcgccactgaagaagcactagatggtgtggagccaagtgaagagttattagca
cttgaaggtgttgaaagacacttagcctatgttttagcaagcaaaggtatcgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgcgctgatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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