Shewanella sp. ANA-3: Shewana3_1049
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Entry
Shewana3_1049 CDS
T00428
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_1049
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shewana3_1049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA_16
AAA
RecA_N
ABC_tran
nSTAND_NTPase5
AAA_24
KdpD
NTPase_1
zf-LYAR
AAA_14
Viral_helicase1
nSTAND3
Zeta_toxin
cobW
AAA_29
AAA_33
AAA_5
DZR
Motif
Other DBs
NCBI-ProteinID:
ABK47284
LinkDB
All DBs
Position
1:1228303..1229667
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AA seq
454 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTITEVRLGAASPGRGTKFAGYAGAGSSEV
KTLDQIDLNALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAEQM
PALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEVALQESPKVIVVDSIQVMH
MSDVASSPGSVSQVRESASYLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVMF
EGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVMVV
WEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNVV
GGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVEAAKHG
FKRAIVPRANVPKKPPAGMEVVGVAKLSEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaaccgcgtacgtgtgcaatgagtgtggacaggattttccacgctgg
caagggcagtgcagtgcttgtcaggagtggaatacgataaccgaagtgcgtttaggcgcc
gcctcgcccggacggggaactaagtttgcgggttatgccggtgctggcagtagcgaagtc
aaaaccttagaccaaattgaccttaatgccttaccacggattgtgagccattttggcgag
ctcgaccgcgtgctcgggggcggcatagtgccaggctcagcgattctgattggcggtcat
cccggtgccggtaagagtacgctgttactccaaaccctgtgccatttagccgagcaaatg
cctgcactttatgtgacgggggaagagtccctgcagcaagtcgctatgcgcgctcatcgc
ttagggctgccaaccaataaactgcggatgttatctgagaccagtgtggagcagatctgc
gaagtcgccctgcaagaatcgccaaaagtcatcgtcgtcgactctattcaagtcatgcac
atgagcgatgtggcatcgagccccggcagtgtgtcgcaggtgcgtgaatcggcctcctat
ttaactcgctttgccaagcaaaacggcattgccgtgattatggtcggccatgtgaccaaa
gacggtagcctcgccgggcctaaagtgcttgagcactgtatcgattgttctgtgatgttt
gaaggggatagcgacagccgttatcgtaccttgcgctcccacaagaaccgtttcggggcg
attaacgagttaggcgtattcgccatgactgagcgtggtttgaaggaagtggctaaccct
tcggcgattttcctctcccgcggtgaagaagaatcctctggctccttagtgatggtggtg
tgggaaggtacgcgtccgctgttggtagaacttcaggtgctggtggacaattcggcgatg
tcgaacccacgccgcgtggcagtggggatggatgcaaaccgtttagccatgctactggca
gtgatgcatcgccatggtgggttacaaatgtcggatcaggacgtgtttgtcaacgtcgtt
ggtggggttaaagtgacagaaaccagtgccgacctaaccttgttgctggccatggtgtcg
agtttccgtggcgatattttaccgagcgatttagtggtgtttggtgaagtggggttatcc
ggggaaattcgccccgtgcccaatggtcaagaacgtctcgtcgaagccgccaaacatggc
tttaagcgggcgattgtgccccgtgccaatgtgccaaaaaagccgcccgcaggtatggaa
gtggtgggtgtggcaaaattatccgaagccctcgaagcgatataa
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