Shewanella sp. ANA-3: Shewana3_1056
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Entry
Shewana3_1056 CDS
T00428
Name
(GenBank) trimethylamine-N-oxide reductase c-type cytochrome TorC
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
shn
Shewanella sp. ANA-3
Pathway
shn00680
Methane metabolism
shn01100
Metabolic pathways
shn01120
Microbial metabolism in diverse environments
shn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Shewana3_1056
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shewana3_1056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_1056
Transporters [BR:
shn02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
Shewana3_1056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cytochrom_NNT
TorC_3rd
Mtrc-MtrF_II-IV_dom
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
Cytochrom_c_NrfB-like
DHC
FdhE_C
CsrA
Motif
Other DBs
NCBI-ProteinID:
ABK47291
LinkDB
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Position
1:complement(1238687..1239865)
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AA seq
392 aa
AA seq
DB search
MKWLINLWRTLNKPTKALTLGAVSISAFIMGIIFWGGFNTALEATNTEAFCISCHSMESK
PYQELQETVHWSNHSGVRATCPDCHVPHNWSRKIARKMEASHDVWGWLFNTVNTPEKFEA
KRLEMASREWKRFDRDNSLACKNCHNYNSIKWESMSPLAQKQMKRAAEIDQSCIDCHKGI
AHHLPEMGTARAPELIAEVGAGVSSVETNQTYYSALTKPLFFSEKGDVEAGTLNVATKVK
VLETQGKRIKIGIDGWRKKIGAGRVIYMDFGVNILSAQLSKDAAETEGVIQTFEEKEDPM
TGLKWQRVEAQIWTDKDYLLTELQPLWGYARDTFRSSCSVCHTQPDEAHFDANTWPGMFQ
GMLAFVNMDQDTQALVQKYLQEHSSTFVKKEH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggttaatcaacctctggcgcacactaaacaaacccacaaaagctctcacctta
ggcgctgtcagcatcagtgcttttatcatgggcatcatcttctggggcggatttaacacc
gcactggaagccaccaacaccgaagccttctgtattagctgccacagtatggaaagcaag
ccttaccaagagttgcaggaaactgtgcattggtcgaatcactctggcgtgcgcgccacc
tgccccgactgtcacgtgccccacaactggagccgtaagattgcccgtaagatggaagct
tcccacgatgtctggggctggttattcaacacggtcaacacccctgaaaaatttgaagct
aaacgcctcgaaatggcgagccgcgaatggaaacgtttcgatcgcgacaattctctggcc
tgtaaaaactgccacaactacaactcgatcaagtgggaaagcatgtcaccactggcgcaa
aaacagatgaaacgcgccgccgaaatcgaccaaagctgtatcgattgccacaaaggcatt
gcccaccatttacctgaaatgggcacggcccgcgcacccgaactcatcgccgaagtcggc
gctggcgtcagctcagtcgaaaccaaccaaacctactacagcgccctgactaagccactg
ttctttagtgaaaaaggtgacgttgaagccggtactttaaacgttgcgactaaagtaaaa
gtgctcgaaacccaaggtaagcgtatcaaaattggtatcgatggctggcgtaagaaaatc
ggcgcaggccgcgtgatctacatggactttggcgtaaacattctgtcggcgcagttaagc
aaagatgcagccgaaaccgaaggtgttatccaaacctttgaagagaaagaagacccaatg
acaggcctgaaatggcaacgggtagaagcccaaatctggaccgataaggattacctgctc
accgagctgcaaccactctggggctatgcccgcgacacgttccgctcaagctgtagtgtg
tgccacacccagccagatgaagcgcatttcgatgccaatacctggccaggcatgttccaa
ggcatgttggccttcgtgaacatggaccaagacacccaagcgctggtgcagaaatacctg
caggaacattcgtcaaccttcgtgaaaaaagagcactaa
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