Shewanella sp. ANA-3: Shewana3_1106
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Entry
Shewana3_1106 CDS
T00428
Name
(GenBank) transcriptional regulator, LysR family
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shn03000
]
Shewana3_1106
Transcription factors [BR:
shn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shewana3_1106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_8
HTH_20
HVO_A0261_N
HTH_30
HTH_IclR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ABK47341
LinkDB
All DBs
Position
1:1300340..1301239
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AA seq
299 aa
AA seq
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MADDIGAELQLIYLFVHLVNAGSFSQAAKELDMPIATVSRKLAKLEEKLDKQLFMRSTRK
LRLTEEGLALFQRYQSVIAQFDELSGVGSDKPEGTLRIAAPISIISIIFIRALNEFGRLY
PDIRLHISQSNELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLASAPKL
THPDDLEAHQLIKVWPLFNWHLKHSNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGP
ELFVKQQIKEGQLKVLLPEWIGEQRRISILYHQRSQQPLKVKVFIEFMQSKAPELFSMI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatataggcgccgagctgcagttaatttatctgtttgtgcatttagtgaat
gcggggagtttttcccaagcggctaaagagctcgatatgcccatcgccactgtgagccgc
aagctggccaaacttgaggagaaactcgataagcaattgtttatgcgtagcactcgtaag
ctgcggttaaccgaagaaggtctagctttatttcaacgctaccagagtgtcattgcccaa
tttgatgaactcagtggtgttggcagtgataagcccgaaggaacattgcgaatagctgcg
ccgatttcgattatctccatcatctttatccgtgcactgaacgaatttgggcgtttatat
cccgatattcgcctgcatatttcccaaagcaatgagttggtggatttgatcgataaaggg
atcgatgtggcgattgtgggcggtgcccagcccgattcctcttgggtgtcgagcacctta
ggcgaactcgattaccgcctgtttgcgacgccggaatatttagcctcggcgcctaagtta
acccatcccgatgatcttgaagcccatcagttaattaaagtgtggccactgtttaactgg
cacttaaagcactcgaatggcgagtcgttttattttaatggcccgacaaaactcacgctc
acggatctacacggggcgattcaggcgactctcgatcacggcggcattctctatggccca
gaattatttgtaaaacagcagattaaagagggacagttaaaagtactcttgcccgaatgg
ataggtgagcagcgcagaatatcgattttgtatcaccagcggagtcagcagccgctaaag
gtaaaagtatttatagagtttatgcagtctaaggcgcccgagctgttttcgatgatttaa
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