Shewanella sp. ANA-3: Shewana3_1124
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Entry
Shewana3_1124 CDS
T00428
Name
(GenBank) RNA polymerase, sigma 38 subunit, RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shn03021
]
Shewana3_1124
Transcription machinery [BR:
shn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Shewana3_1124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
ABK47359
UniProt:
A0KU90
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All DBs
Position
1:1322334..1323314
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AA seq
326 aa
AA seq
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MSRINSTAAEELVDFSVDTAEFDLDKEDIAADLVQELGLEQQVQDDLQKNLDATQLYLGE
IGFSPLLSAEEEVYFSRKALKGCEKSRNRMIESNLRLVVKIARRYNNRGLALLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTARE
LAQKLDHEPTAEEIAEKLQVSSVDVSRMLKLNEKITSVDIPLGGDNDKALLDVLADDDNV
GPDYKVQDEDISNSVVKWLNELNTKQREVLARRFGLLGYEPSTLEDVGAEIGLTRERVRQ
IQVEALKRLRDLLGAQGLSVEALFRN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcataaatagcactgccgcagaagaactagtagatttttccgtagataccgca
gagtttgatctcgataaagaggatattgccgctgatttagttcaagaactaggactcgaa
caacaggttcaagatgacctgcaaaaaaatcttgatgccactcagctctatttaggtgaa
ataggattttccccactgcttagcgcagaagaagaagtttacttttcccgtaaggcctta
aaaggctgcgaaaaatcccgtaatcgcatgattgagagtaacctgcgactcgtggttaaa
attgcccgtcgttacaataatcgcggcctagcgctgctggatttaatcgaagagggtaat
cttggcttgatccgtgcggtggaaaaattcgatccagaaagaggcttccgtttctcaacc
tatgcgacttggtggatcagacaaacgattgaacgtgccatcatgaatcaaacccgcacg
attcgcttgccaatccatgttgtaaaagaactcaacgtgtatttacgtacggctcgggaa
ttagcgcaaaaacttgaccacgaacctacggcagaagaaattgccgaaaaactgcaagta
tccagtgttgacgtcagccgtatgctgaagctcaatgagaagatcacctctgtcgatatc
cccttaggtggcgataacgacaaggcgttactcgatgtgctggccgatgacgacaacgta
ggccctgactacaaagtacaagatgaagacatttcaaactcagtggtgaaatggcttaat
gaactcaataccaagcaaagagaagtgttagcgcgccgctttggtttgttaggttatgaa
ccctcaacccttgaagacgtcggtgctgaaattggcctcacccgtgaacgtgttcgccaa
attcaagtggaagccctaaaacgcctacgtgatttgctgggcgctcaaggtctctctgta
gaggcactctttagaaactaa
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