Shewanella sp. ANA-3: Shewana3_1132
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Entry
Shewana3_1132 CDS
T00428
Name
(GenBank) DNA polymerase III chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03030
DNA replication
shn03430
Mismatch repair
shn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shewana3_1132
03430 Mismatch repair
Shewana3_1132
03440 Homologous recombination
Shewana3_1132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shn03032
]
Shewana3_1132
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_1132
Enzymes [BR:
shn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shewana3_1132
DNA replication proteins [BR:
shn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shewana3_1132
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shewana3_1132
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ABK47367
LinkDB
All DBs
Position
1:complement(1336930..1337394)
Genome browser
AA seq
154 aa
AA seq
DB search
MTQALFYLLPPMGVNTALNDMYQLACRLAQQGFINQQQVYIHCQDKNIAFEIDELLWQFE
PSAFVPHNLKGEGPTTGSPVEIGFDRLGPNKSRQLLINLADQVPPFAVNFGQIFDFVAND
DQHKAIARERYRQYRGLGIELTTQNLATHPLNLA
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagcgctgttttatttactgccgccgatgggcgtgaacacggcccttaatgac
atgtatcaattagcttgccgtctagcccaacagggatttataaaccagcagcaggtctat
attcactgtcaggacaagaacatcgccttcgaaatcgacgagttactatggcagtttgaa
cccagtgcatttgtcccccataacctcaaaggtgaaggccccactactggctcacccgtt
gaaatcggttttgacagactcggcccaaacaaaagtcgccaacttctgattaatcttgca
gaccaagtgcctccgtttgcggtaaactttggtcaaatcttcgattttgtggctaatgac
gaccaacataaagcgatagcacgtgaacgctatcgccaatatcgtggcttagggattgaa
ttaacaacccaaaatttagcaacacatccacttaatttagcttga
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