Shewanella sp. ANA-3: Shewana3_1250
Help
Entry
Shewana3_1250 CDS
T00428
Name
(GenBank) Integrase, catalytic region
Organism
shn
Shewanella sp. ANA-3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABK47485
UniProt:
A0KUL6
LinkDB
All DBs
Position
1463938..1465479
Genome browser
AA seq
513 aa
AA seq
DB search
MSAKRIAMRKIREVLRLRLEADLSVRQISICTKVSVGSIQKLLKSAQALGLTWPLPTELD
DGRLAALFYPQADTTISARHVVPDWPSVHQELKRKGVSKQLLWEEYTQRYPNSCYSYSQF
CDRYKSWCQLQKRSMRQIHKAGEKLFIDYCGPTVPIVSPTTGEVRQAQVFVAVLGASNYT
FAEATWSQSLPDWLQSHVRAFEFFGGTPALLIPDNLKSGVSKACRYDPELNPSYQQLAEH
YQVAVMPARPYKPKDKAKAEVGVQIVERWILARLRHQTFFSLAELNQCIRALLNELNERP
FKQLPGNRRDAFEQLDRPALGPLPVHPYRYVAIKTVKVNIDYHVSYEQHHYSVPHQYVGQ
QLELHAGDTLLQVYHQQQLVASHPRKTIPGMSTLPEHMPERHSKQQRWTPGRLKQWAADI
GPSTLCWVSERLEEKAHAEQAYRLCLGLLSLSREYPPSRVEACCQLANREGLVRLKQLKS
VLTSGRDQLPASPLSYPELPQEHENIRGPQSFH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagaggattgcaatgcgtaaaattcgtgaagtactgcgactgcggctggaa
gctgacctctctgttcgccaaatcagtatctgtaccaaggtcagtgtcggctccatccag
aaactcctcaaaagtgcccaggcgctcggccttacctggcccttacctaccgagcttgat
gatggccgactggctgccctgttctatccgcaggccgataccaccatctcggcccgccat
gttgtgccggattggccctctgtccatcaggagctcaagcgcaagggggtctccaaacag
ctgctctgggaggagtacacccagcgctatcccaatagctgttacagctactcccagttc
tgtgaccgttacaagtcctggtgtcagttgcaaaagcgctccatgcgccagatccacaag
gcgggggaaaagctctttatcgactactgcgggcccacggtgcccatcgtgtcgccgacc
acgggtgaggtccgtcaggcacaagtctttgtcgccgtgctcggtgcgtccaactacacc
tttgccgaggccacctggtcacagtcactgccggactggctgcaaagccatgtccgtgcc
tttgagtttttcggcgggacaccggcactgctgatccccgacaacctcaagagcggtgtc
agcaaggcttgccgatacgatcccgagctcaaccccagctaccagcagttggccgagcac
tatcaggtggcggtgatgccagctcgtccttacaagcccaaggacaaggccaaggcggag
gtgggtgtgcagatcgtcgagcgctggatcctggcccgtctacgccatcagaccttcttc
tcgcttgccgaactcaaccagtgcatccgtgccttgctgaacgaactcaacgagcgtccg
ttcaagcaactgcccggtaaccgacgtgacgcatttgagcagttggaccgcccggcactg
ggaccactgccggtgcatccctatcgctatgtcgccatcaaaacggtcaaggtcaacatc
gactatcacgtcagttatgagcagcaccattactcggtgccacaccagtatgtgggtcag
caactggagctccatgcgggcgataccctgcttcaggtctatcaccagcaacagctggtc
gcgagccatccacgtaaaaccatcccggggatgagcacgctccctgagcacatgccggaa
cgtcacagcaagcagcaacgctggaccccagggcgtcttaaacagtgggctgctgacatc
ggaccgagcaccttgtgctgggttagcgaacggttggaagagaaagcccatgccgagcag
gcataccgactctgcctggggctgctgagtcttagccgggagtatccgccatcacgggtt
gaagcctgttgccagttggccaaccgggaaggtctggtgcgactcaaacagctcaagtcg
gtgctgaccagtggccgcgaccaactgcccgcaagcccgctgagctacccagagttaccg
caagagcacgagaacatccgtggcccccagagcttccactaa
DBGET
integrated database retrieval system
