Shewanella sp. ANA-3: Shewana3_1404
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Entry
Shewana3_1404 CDS
T00428
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shn03036
]
Shewana3_1404
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_1404
Chromosome and associated proteins [BR:
shn03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Shewana3_1404
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Shewana3_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
YkyA
Viral_P18
Motif
Other DBs
NCBI-ProteinID:
ABK47638
LinkDB
All DBs
Position
1:complement(1621992..1622384)
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AA seq
130 aa
AA seq
DB search
MSEFLEILTHGRRFKAAVKDLSIEELRDLAAKLDKILVERESMAAEEQQAIAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKAAGKKRAPRPAKYQIEVNGEVIQWTGQGRMPTVFKNEVN
KGRSMDDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttagagatattaactcacggtcgtcgttttaaagctgcagtaaaagat
ctcagcattgaagaactgcgagatttagcggctaagctagataaaattttagttgagcgt
gagtcaatggcagcagaagagcagcaagctattgctgcacgtaatgctaaaatcgaagaa
atccgccaacaaatggaagcagttggtttatcaatcgacgacttaggtggcgttgcagtt
aaagctgcaggtaaaaaacgcgctccacgtccagcaaaataccaaatcgaagtaaacggc
gaagtgatccagtggactggtcaaggtcgtatgccaacggtatttaagaacgaagtcaat
aaaggccgttctatggatgatttcttaatctaa
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