Shewanella sp. ANA-3: Shewana3_1414
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Entry
Shewana3_1414 CDS
T00428
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
shn
Shewanella sp. ANA-3
Pathway
shn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shewana3_1414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_1414
Transporters [BR:
shn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shewana3_1414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABK47648
UniProt:
A0KV29
LinkDB
All DBs
Position
1:complement(1638728..1640125)
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AA seq
465 aa
AA seq
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MAIATLFTALLVCMFLGMPIAIALGFSSMLTILFFSNDSLASVALKLYESSSEHYTLLAI
PFFILSSAFLSTGGVARRIIDFAMDSIGHIRGGLAMASVMACMLFAAVSGSSPATVAAIG
SIVIVGMVKAGYPEKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGL
MMGFLLMIVIYIVARFKNLPSRPFPGFKQLGISSAKALGGLALIIIVLGSIYGGVASPTE
ASAVACMYAYFIAVFGYRDIGPLKNVAWRNPNEPIPSAIVRNLGHMALGLIKTPIDKEIR
HVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAEHIVGMGLPAWGFLIIVNLLLLA
AGNFMEPSAIVLIMAPILFPIATHLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGIT
GRSIGWVIQSVLPWLALMLAFLALITYVPQISLFLPEFLDKLNGY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccattgcgaccctctttactgccctactcgtctgtatgtttttaggtatgcctatc
gcgattgcgttaggtttctcgagcatgctgacgattttattcttctccaacgactccctc
gcctcagtggcgttaaaactttatgagtcatcgtcagagcactataccctgctggcgatc
cccttctttattctgtcctcagcctttctgtcaaccggtggggtggcacgacggatcatc
gactttgcgatggacagtatcggccatatccgtggcggtttagccatggcctctgtgatg
gcctgtatgttgtttgccgcggtatcgggttcatctccagcaactgtggccgccatcggt
tccattgttatcgtcggtatggtgaaagcaggttaccccgaaaagtttgccgccggtgtg
attaccacttctggcaccttagggattttgatccccccttcaatcgtgatgctagtgtat
gcggcggcgacggaagtctcggctgccagaatgtttatggcgggcttaatcccaggtttg
atgatgggtttcctgctgatgatagtgatttatatcgtcgcccgttttaaaaatctgcca
tcacgccccttccctggctttaaacaactggggatttccagtgctaaagccttaggtggt
ctggcgctgatcattatcgtgttaggttcaatctatggcggtgtagccagtccaaccgaa
gcctctgccgtagcctgtatgtatgcctatttcattgcggtatttggttatcgcgatatt
ggcccattgaaaaatgtcgcatggcgtaaccctaatgagccgatccccagcgccattgtc
cgtaacttaggccatatggcgctcggactgattaaaaccccaatcgacaaagaaatccgc
catgtggtgcgcgacggggcaaaggtcagcatcatgttgctgtttatcattgccaacgcc
atgctattcgcccacgtgctgactactgagcgtattccccatatcattgccgaacatatt
gtgggcatgggcttacctgcgtggggcttcttaatcattgtcaacttactgctgttagcg
gcgggtaactttatggagccatcggccatcgtgctgattatggcgccaatcttgttcccg
attgccacccacttaggtatcgaccctatccacttaggcatcatcatggtggtgaacatg
gagattggtatgctgacaccgccggtggggcttaacctcttcgtgacggcggggatcaca
ggccgcagtatcggctgggtgatccaatcagtactaccttggttagcactgatgttggcc
ttcttggcgcttatcacctacgtgccacaaatctccctgttcttgccagaatttctggat
aagctcaacggatattaa
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