Shewanella sp. ANA-3: Shewana3_1420
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Entry
Shewana3_1420 CDS
T00428
Name
(GenBank) Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Shewana3_1420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shn03000
]
Shewana3_1420
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_1420
Enzymes [BR:
shn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Shewana3_1420
Transcription factors [BR:
shn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Shewana3_1420
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Shewana3_1420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_3
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ABK47654
UniProt:
A0KV35
LinkDB
All DBs
Position
1649381..1651009
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AA seq
542 aa
AA seq
DB search
MKQTSVSQNSAPQPPSEPTSSDAQDCQISAGICREARMSRDPRFDGKFFVGVLSTGIYCR
TVCPAVAPKEENVRYFDSAIKAAQAGLRPCLRCRPDSAPGSNPWKGTNTTLDRAIGLIEA
GALSGEHGLTVEALADKLGISSRYLNKLFTAGFGTSPKQFALYRQLLFAKQLLHQTQLPI
TQVALAAGFNSIRRFNEAFQQALQLTPTQLRKSSQKSTIKIDDGESTELACSQEMPAHSL
SLYQYYRPPLDWSAQLAFYRLRAVEGMEWFSESVAPHFHEAIDPNIPLEYGRTLQIEDIR
AVVHIVHEAPLHRFKITLTLTPDSPLSGLQKLITQVRRILDLDADMQKIEHNLQHLTDLK
LSSKSGLRIPGAGAVFEAGCRAVLGQQVSVVQATKLLNILVEAYGECFSLNGREYRLFPT
PQAIRDASLDELKMPGARKLALNALAAFICEQPEASVDEWIGVKGIGPWTIAYAKLRGLG
DPNIFLHTDLIVKKQLLACVAEQSGLDIETVKQLDYTALAQRVSADIAPWGSYLTFQLWS
NA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagacaagcgtgagccaaaattcagccccacaaccgccatccgagccgacatca
agcgacgcgcaggattgccaaatatccgccgggatttgccgtgaagcgcgcatgagccgc
gatccacgttttgacggtaagttctttgtgggcgtgttaagtacggggatttattgccga
acagtgtgcccagcagtagcgccgaaggaagaaaatgtgcgttattttgactcggccatt
aaagctgcacaggcgggactcaggccttgtctacgttgccgccccgacagtgctcctggc
tctaatccgtggaaaggcactaacacaaccctagacagagccataggtttgattgaagct
ggcgccttatctggtgagcacggattaacggtcgaggccttggcggacaaattggggatc
agcagccgttatttaaataaattatttaccgcaggatttggcacttcacctaaacaattt
gccctctatcgtcagttattgttcgcaaagcagttgttgcatcagacgcagttgcccatc
actcaggtcgcccttgccgcaggctttaacagtattcgccgttttaacgaggcatttcag
caggcgctgcaattaacgcccacccagttgcgaaaatccagtcagaaatcgactattaaa
atagacgacggggagagtactgaactcgcttgttcacaggagatgccagcgcacagcttg
agtctgtatcagtattatcgaccgccgctcgattggtcggcgcaattagccttttatcgc
ctgcgcgccgtcgaaggcatggaatggtttagtgagagtgtagcccctcacttccatgag
gcgattgacccaaatataccacttgagtatggccgcaccctgcaaattgaggatattcgc
gcagtggtacatatcgtccatgaggcgcctttgcatcgctttaaaatcacgctgacgtta
acgcctgactcgcccttatcgggtctacaaaagctcatcacccaagtgcggcgcatttta
gatctcgatgcagatatgcagaagattgaacacaaccttcagcatttgaccgatcttaaa
ctcagtagcaaatccgggcttaggatccccggcgcaggcgcggtgtttgaggcgggttgc
cgagccgtcttaggtcagcaggtgagcgtagtgcaggcgactaaattactgaatatattg
gtcgaagcctatggcgagtgctttagtttaaacggacgggaatatcgcctgtttcctacg
ccgcaggcgattcgtgatgcgagtctcgatgagcttaaaatgcccggtgcccgcaaactg
gcgctcaatgcgcttgcagcctttatctgtgagcagcccgaagcctcagtcgatgagtgg
attggggtaaaaggcataggcccttggaccattgcctacgccaaattacgtggacttggc
gatccgaatatcttcttgcacacggatttaattgttaaaaaacaattgttagcctgtgtt
gccgagcaaagtggcttggatattgaaacggtaaaacagctggattatacggcgcttgca
cagcgggtgagtgcggatatcgccccttggggaagttatttgaccttccagctgtggtcc
aatgcatag
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