Shewanella sp. ANA-3: Shewana3_1577
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Entry
Shewana3_1577 CDS
T00428
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shn
Shewanella sp. ANA-3
Pathway
shn03030
DNA replication
shn03430
Mismatch repair
shn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shewana3_1577
03430 Mismatch repair
Shewana3_1577
03440 Homologous recombination
Shewana3_1577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shn03032
]
Shewana3_1577
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_1577
Enzymes [BR:
shn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shewana3_1577
DNA replication proteins [BR:
shn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shewana3_1577
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shewana3_1577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ABK47811
LinkDB
All DBs
Position
1:1846418..1847104
Genome browser
AA seq
228 aa
AA seq
DB search
MGPWWVNVKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQIL
SIGLVPIENGAIPLMGAQQKLVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTR
GHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
RERYGLPIYGAHSALTDALACGELLLAQVASMGGADELKVGELLAYSR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggggccttggtgggtgaacgttaagctgcgctggcgtgcgctacgctgccagcatcgg
ctatttaaggattattaccaatccttagtgccgctgttggagttacccattagtcgggcg
cccttaattgcgatggatttggagatgacaggcctcaaccctttacaggaccaaatctta
agtattgggctagtgccgattgaaaatggggcgattcccttgatgggcgcgcagcaaaaa
ctggtgcaaatacagggtagtgtagggcagagtgcgaccatccatgggatcctcgataat
catttaaccgaggcggtgacgattgaagaggcgatggcatggtttgtggctcaaacccgt
ggtcatgtattggtcgcgcaccattcccccctcgattgccgtttcttacagcaagatatc
ttgtcgatttatcatcaagcgattgtactgcctgcgattgatactctactgctggaaaaa
caccgtttgctacgcgaacactcagtgcttaaagaaggcagcttaaggcttggggcatgc
cgagaacggtatggattgccgatatatggcgcccacagcgccctgactgacgcactggcc
tgcggcgaactgttattggcgcaggtggcaagcatgggcggcgccgatgagctaaaggtg
ggggaattgttagcttactcacgctaa
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