Shewanella sp. ANA-3: Shewana3_1889
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Entry
Shewana3_1889 CDS
T00428
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shn01002
]
Shewana3_1889
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shn01011
]
Shewana3_1889
Peptidases and inhibitors [BR:
shn01002
]
Cysteine peptidases
Family C82
Shewana3_1889
Peptidoglycan biosynthesis and degradation proteins [BR:
shn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Shewana3_1889
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABK48120
UniProt:
A0KWF1
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Position
2238829..2240505
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AA seq
558 aa
AA seq
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MMPVSRLTLNPNTSNRSFSSLKRWPLGALLMGLSLAVIESYAAEPLVTAPLSVEAERVEQ
PALPPSAEVADPDTAVEQILGQTLLLSLADVSPVFSANYQQLIQWQHRALNNEEQLKLRQ
MQLQLDNYWQYLDAQAECTAPCLSAALIPKDTYFRAVVLKLKQLMALAESSSWETLILED
KLSPGQESPLIAPIAQRLFLLGFLAEMPSTASESVADEAALPVSELGSEPTIEPDIISPD
ATTHAGTVARTEQASTDNNSMPYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYA
RAKLLAKNTLRQQLFTRTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLS
SHISSVVLNPQWRVPRTIVRRDIMPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELA
SSHFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVE
ELARWFQTHLVKDTRLWDKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIY
HLEVEFTQAVPAAIFYIL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgtgagtcgattaacgctaaatcctaatacatccaaccgcagctttagttca
cttaagcgctggccactcggtgcattgttgatgggactttcgcttgcagtcatagaatcc
tacgccgccgaaccactggtaacagcacctttaagcgttgaagcagaaagggttgaacag
cccgctcttccgccttccgcagaagtcgctgacccagacactgcagttgagcaaattcta
gggcaaaccttactcttgagtcttgccgatgttagcccggtttttagcgccaattatcaa
cagttgatccagtggcaacatagggcgctgaataacgaggagcaattgaagcttcgccaa
atgcagctgcaattggataactattggcagtatcttgatgcccaagctgaatgcactgcg
ccatgcctatcggcagcactgatccctaaggatacgtattttcgcgctgtggtcctcaag
ttgaagcaattgatggcgttagcggaatcctcttcgtgggagacactcatcctcgaagat
aagctcagtccagggcaagagagcccgctcattgcgccgattgcacagcgccttttccta
ttaggttttctagcagagatgcctagcacggcttccgagtctgtagccgatgaagcagct
ttgccagtatctgaactaggatctgagccaaccattgagccagacatcatttcaccagac
gcaacaactcatgctggaacagttgcacggactgagcaggcttcaactgataacaattcc
atgccttatgatgatgaactggttcgcgcgatcaaaaactttcaaacccagcatggctta
caggcggatggggtgataggtaaacaaaccctgtattggcttaatcaatctccctatgct
cgggcaaagctgctggcgaaaaatacccttaggcagcagctttttactcgcaccttacct
gcaagctatctggtgataaacatccctgcatttgagctgcaattcgtcgaagcggggaag
gtgatccttaattcaaaagtaatagtgggcaaagcatcgcggccaacaccgctgctaagt
agtcatatctccagcgtggtgctcaatccacagtggcgagtgccacgcaccattgtgcgg
cgcgatatcatgccccatatacgccaagatggtcattacctgcaggaccgcgggtttgat
gtttacgactatgacggcgcgcgagtcgaacattcgccgcaggagtggcaagagttagcg
tccagccattttccctatcgtttagtgcaacgccccggggcgaaaaacgccttaggtcga
tataaatttcatttcgacaacagttttagtgtgtatttgcacggaacttctgagccaagt
ctctttaaaaagaccgatagggccttatcatcgggttgcattcgggttgaaaaggtcgag
gagctggcccgctggtttcaaactcacttagttaaagatacgcgcctttgggacaaatta
acgcctaataccactcaatcccaatggtttgcgctgtcagataccatgcctgtctacacg
gtttattggacagcatggcttgatgatgctgggcaaattcaatatcgcaatgatatttat
cacttagaagttgagtttacccaggcggtgcctgcagcaattttttacattctataa
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