Shewanella sp. ANA-3: Shewana3_1972
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Entry
Shewana3_1972 CDS
T00428
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shn03032
]
Shewana3_1972
03400 DNA repair and recombination proteins [BR:
shn03400
]
Shewana3_1972
Enzymes [BR:
shn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Shewana3_1972
DNA replication proteins [BR:
shn03032
]
Prokaryotic type
DNA Topoisomerases
Shewana3_1972
DNA repair and recombination proteins [BR:
shn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Shewana3_1972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ABK48203
UniProt:
A0KWN4
LinkDB
All DBs
Position
1:2347835..2350591
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AA seq
918 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRALAEVETEDNGRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHVQ
GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEEL
LEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPVREYAEDKYIIMATSNGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGNA
VLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKGDGAILTVTENGYGKRT
ELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSIIG
RNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIVPVVTEGDSVQEEPLEDE
LEEELDEDEELDDEQDED
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcatcatctatttcgccaattaatatcgaagacgaactaaagaattcg
taccttgattacgccatgagcgtcatcgtgggacgtgcattaccagacgtgcgtgatggc
cttaagcctgtgcatcgccgcgtgctgtttgccatgagtgaattgaagaacgattggaac
aagccgtacaaaaagtctgcccgtgtggttggtgacgtgatcggtaaatatcacccccat
ggtgattcggcggtttacgatactatcgtacgtatggctcagcctttctctctgcgttac
accttagtcgacggtcaaggaaacttcggttcggttgacggtgactccgcagcggcaatg
cgttataccgaaatccgtatggataagttagcgcaccagctcctcgccgatcttgaaaaa
gaaaccgttgactatgtgcccaactacgatggcacagaacaaattcccgctgtattaccg
acacgtgtccctaacctgttaatcaacggttcatcgggtattgcggtcggtatggcgaca
aacattccgcctcacaacttaaccgaagtggtcaaaggctgtttagcgctgatcgccgat
cctgcgctgtctatcgaacagttgatggaacatattcctggcccagacttcccaacggct
gcgattatcaacggccgtaaaggcattatcgatgcgtataagacgggccgcggccgcgcc
gtcatgcgcgcactggctgaagtcgaaaccgaagataacggccgtgaacgcattatcgtc
accgaaattccttatcaggtgaacaaggcgaaactcatcgagaaaatcgctgagttagtc
aaagataagaagattgaaggcattagcggcctgcgcgacgagtctgacaaagacggtatg
cgtatcgttattgaaatcaaacgcggtgaagtgggtgaagttgttttgaataacctctat
gcccagacacaaatgcaatgttcttttggtatcaacatggtggcattgaccaatggtcag
cctaagttgttcaacttaaaagaaatgctcgaatgctttatcctgcaccgccgtgaagtg
gtgactcgccgtaccgtattcgaactgcgtaaagcgcgcgaacgtgcccatattcttgag
gcattagcggtcgcactcgccaatatcgatccgattattgcgctgatcaaagcatctcct
accccagctgatgcgaaagtcaaactggttgagcagggctgggcacttggccatgtacag
ggcatgcttgaaaaagcgggtgacgatgcggcgcgtcctgaatggttagagccagaattc
ggtatccgtgatggcttatattacctgaccgagcaacaggctcaggcgatccttgagctg
cgtttacaccgtttaactggtcttgagcacgataagatcatcgccgaatacgaagagctg
ctcgagttcatcgcgggtctgctgtttattctgcgcagccctgagcgtttgatggaagtc
atcaaagaagagctagaagaaattctggctgaatacggtgatgcacgccgcactgtcatc
aacgctaatgaaattgatatgagtcttgaagacttaatcaacgaagaagacgtggttgtg
accctgtcacacttaggttacgccaagtaccaaccgctgagcgattaccaagcccagcgc
cgtggtggtaagggtaaagccgcgactaaagtgaaagacgaagatttcgttgaaaaacta
ctggttgccaacactcacgatacgattctgtgcttctctgatttcggtaagatgtactgg
ctcaaggtctatcaattaccgctggcaagccgcacatcgcgcgggcgtccgattgttaac
ttactgccgctgtccgatggcgaacgcattacggcgattctgccggtgcgtgaatacgca
gaagataagtacatcatcatggcgacttctaacggtaccgtgaagaaaactgcgctgacg
gcttacagcaacccacgtgctaacggcattatcgccgtgaacctgaaagatggtgaccaa
ctgatcggtgtcgatatcactaatggtgatgatgagatcatgttgttctcgaacgaaggt
aaagtggttcgctttaaagaaggcgaagaagtcgccgtactcgatgaaaacggcaacgca
gtgctggacgaagaaggcaaccctcaaatcaacttcaagggcgtgcgtccaatgggccgc
ggcgcgacaggtgttcgcggtatcaagctcgaagaaggtcaaagagtagtgtctctcatc
gtacctaagggcgatggcgctatcttaaccgtgaccgaaaacggttacggtaaacgtact
gaactgtccgaatacccatcgaagagccgcgcgaccaaaggtgtggtatcgatcaaggtg
agcgagcgtaacggtgcagtggttggcgcggtacaagttggcggcaatgacgaaatcatg
ctcatcagcgacaaaggtaccttagtgcgtacgccagcgaacggtgtgtctatcatcggc
cgtaacacccaaggtgtgaccattatccgtaccgcaagtgacgagaaagtggttggtctg
cagcgtattgatgagatccaaggcgacgaagatgaagtcgagctggatgaaaacggtatg
ccaatcgtcccagttgtcactgaaggtgactctgttcaagaagagcctttagaggatgaa
ctggaagaagaattagacgaagacgaagagcttgacgacgagcaagacgaagactaa
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